KEGG   Niabella ginsenosidivorans: A8C56_15835
Entry
A8C56_15835       CDS       T04418                                 
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
nia  Niabella ginsenosidivorans
Pathway
nia03030  DNA replication
nia03430  Mismatch repair
nia03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A8C56_15835
   03430 Mismatch repair
    A8C56_15835
   03440 Homologous recombination
    A8C56_15835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nia03032]
    A8C56_15835
   03400 DNA repair and recombination proteins [BR:nia03400]
    A8C56_15835
Enzymes [BR:nia01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A8C56_15835
DNA replication proteins [BR:nia03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     A8C56_15835
DNA repair and recombination proteins [BR:nia03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     A8C56_15835
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_22 AAA_5 DNA_pol3_delta AAA_24 Rad17 AAA_14 AAA_30 TIP49 AAA_19 AAA_16 AAA_2 AAA_18 RNA_helicase AAA_7 nSTAND3 Mg_chelatase Sigma54_activ_2 AAA_assoc_2 T2SSE AAA_33 DUF815 TsaE QueC
Other DBs
NCBI-ProteinID: ANH82237
UniProt: A0A1A9I3I9
Position
3789417..3790556
AA seq 379 aa
MDKFIVSARKYRPQTFDTVVGQQHITTTLKNAIRQNQLAHAFLFCGPRGVGKTTCARILA
KTINCEHPTPEGEACNECNSCISFNQGTSLNIHELDAASNNSVDDIRTLVDQVRFAPQAG
RYKVYIIDEVHMLSSSAFNAFLKTLEEPPPYAIFILATTEKHKILPTILSRCQIFDFKRI
TTNDTVTHLEAICEKEGVTADKAALQTIAQKSEGCMRDALSIMDKIVSFTNGELTYSNTL
EHLNILDEDYYFRLLEDMLQQELAGAMLLYDDINRKGFEGDLVLNGFAAFIRNLLVSSDE
KVVALLDTVESFRQRYMDMARRVPAPFLISALNILNEAEINYRAARNKRLHVELTLIKLC
YLQQALEVTSGDGELHKKK
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggataaatttattgtttcagcaaggaaatacaggccacaaacctttgacacggttgtg
ggccagcagcatattaccacaacgcttaaaaacgcgatcagacagaaccagttagcgcac
gccttcctgttttgcggaccaagaggcgtaggtaaaaccacctgtgcccgcatcctggca
aaaacgatcaactgcgagcatcccaccccagaaggtgaagcctgtaatgaatgcaattcc
tgcatttcatttaaccagggcacttcactcaatatccatgagctggatgcggccagcaac
aactctgtcgacgatatccgtaccctggtagaccaggtacgttttgctccccaggccggc
agatacaaagtgtacatcatagatgaggtgcatatgctaagctcctccgctttcaatgcg
tttttaaaaacactggaagagcctcccccctatgctatttttattttagcaaccactgaa
aagcacaagatcctgcctacgatcctgagccgttgccagatctttgattttaaaaggatt
actaccaatgacacggtaacgcacctggaagctatttgcgaaaaagaaggcgtaactgct
gataaggcagctttacaaaccattgcccagaaaagcgagggctgtatgcgcgatgcatta
agcattatggataagatcgtaagctttacgaacggagagctgacgtattccaatacgctg
gaacacctgaatatactggatgaagattattatttcaggttgctggaagatatgcttcaa
caggagctggccggcgctatgctgctgtatgatgatattaaccgcaaaggctttgaagga
gatcttgtattaaacgggtttgcagcattcatcaggaacctgctggtaagcagcgacgaa
aaagtggtagcgctgctggacaccgttgaaagcttcaggcagcgatatatggacatggcg
cgcagggtaccggcacctttcctgataagcgcattaaatattttaaacgaggcagagatc
aattatcgcgctgcgcgcaataaacgcctgcatgttgaactgacgctgataaaactctgc
tacctgcaacaggccctggaagtaacttcgggagacggggaattacataaaaaaaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (40)   

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