KEGG   Niabella ginsenosidivorans: A8C56_21890
Entry
A8C56_21890       CDS       T04418                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
nia  Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:nia00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nia03009]
    A8C56_21890
Enzymes [BR:nia01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     A8C56_21890
Ribosome biogenesis [BR:nia03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    A8C56_21890
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 MTS Cons_hypoth95 Methyltransf_25 UPF0020 Met_10 PrmA Methyltransf_15 Methyltransf_12 PCMT Methyltransf_11 N6_N4_Mtase TPMT
Other DBs
NCBI-ProteinID: ANH83278
UniProt: A0A1A9I6H7
Position
complement(5194736..5196169)
AA seq 477 aa
MARKKRKNIVLENILIEDYAAEGRSIAHANGKVIFVEQAVPGDVVDIRLGKNKKDWAEGA
PVIFKSYSKERVDPFCAHFGVCGGCQWQMLPYEQQLHYKQQQVKDQLQRIGKIPLPEIRP
ILGASQTKWYRNKIEYTFGTELFLPKEQFNALKEAGTNPHEYGKQGVAGFHARGFWDKIV
DLQTCYLQAAPTNAIRLAVKDFAKAHNYSFYDLRRHSGFLRTMQIRLCETGELMVNLVMG
EDDEEKRTPLLNELAEKFPQITTLLYTINTKRNDSLHDLEPVVYKGKGYVIEKLEEYQFK
IGPQSFFQTNTLQAVELYRIARDFAELTGNETLYDLYCGTGSIGIFCSKKAAKVIGVELI
DAAIEDAKENAALNGLEKTRFYAGDVIDICTDSFFEQHGRPDVIVTDPPRAGMHEKLVNK
INEMAAPTVVYVSCNPATQARDLALLNGKYEVTKVQPVDMFPHTLHIENVVQLKLRT
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggctcgtaaaaagagaaaaaatatcgttcttgaaaacatccttatagaggactatgcc
gctgaagggagatccattgcccatgcaaacggcaaggtgatttttgtagagcaggctgtg
cccggagatgtggttgatatccggctgggcaaaaacaaaaaagactgggcagagggtgct
cctgttatttttaaatcctattccaaagaacgggtagatccgttttgcgcacattttggc
gtgtgcggtggctgccagtggcagatgctgccctatgaacagcaattacactacaagcaa
cagcaggtgaaagaccagttgcagcggataggaaagattccgctgccggagatccggccc
atattgggcgcatcccaaacaaaatggtaccgcaataagatcgagtacacttttggaaca
gagctgttcctgcccaaagagcagttcaatgcccttaaagaagcaggcaccaatccgcat
gaatacggaaagcagggcgttgccggctttcacgccaggggtttctgggataagattgta
gacctgcaaacctgctacctgcaggcagcgccgaccaatgccattcgcctggccgtaaag
gactttgcaaaagcccataattacagcttctatgatctccgccggcacagtggttttttg
cgtacaatgcagatccgcctttgtgaaaccggtgaactgatggtaaacctggtaatgggg
gaggatgacgaagaaaaaagaacacccctcctcaatgaacttgctgaaaaatttccgcag
atcaccaccctcttatataccattaataccaaaaggaatgacagcctgcatgatctggag
cctgttgtctataaaggaaaaggatacgtgatagaaaaactggaagaataccagttcaag
atcgggccccaatcgttcttccagaccaataccctgcaggctgtggagctataccgcatt
gcaagggactttgcagaactgaccggcaatgaaaccctgtatgatctgtattgcggaacc
ggaagcatcggaattttttgcagtaaaaaagccgcaaaggtgattggagtggagctgatt
gacgcagcaattgaagatgcaaaagaaaatgcggcactgaacggattggagaagacccgt
ttttatgcaggcgatgtaattgatatttgtacagatagtttttttgaacaacatgggcgg
cctgacgttatagtcactgatcccccaagggccggaatgcatgaaaagctggtaaacaaa
attaatgaaatggctgcacctactgttgtttatgtaagctgcaacccggctacacaggcc
cgggacctggcactgctcaacgggaaatacgaagtaacaaaagtacagccggtggatatg
tttccccataccctgcacatcgaaaatgtagtgcaactaaaactccgtacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

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