KEGG   Nitrosarchaeum sp. AC2: DSQ20_03165
Entry
DSQ20_03165       CDS       T06694                                 
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
  KO
K07739  elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
Organism
nic  Nitrosarchaeum sp. AC2
Brite
KEGG Orthology (KO) [BR:nic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nic03016]
    DSQ20_03165
Enzymes [BR:nic01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.311  tRNA carboxymethyluridine synthase
     DSQ20_03165
Transfer RNA biogenesis [BR:nic03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    DSQ20_03165
SSDB
Motif
Pfam: Radical_SAM_C Radical_SAM Acetyltransf_10 Acetyltransf_7 Acetyltransf_1 FR47
Other DBs
NCBI-ProteinID: QLH10602
UniProt: A0A7D5MAZ8
Position
complement(544996..546588)
AA seq 530 aa
MNKLDVLFSTACTEITQNLLTIKEPTKKQVKAEIKKICAKYALERIPRNHEILSTVKDTD
FFKLQKVLLKKPIKTASGVSVIALMPKPYACPHGRCTYCPGGIEFNSPNSYTGKEPSTLN
AIQNEYDPKLQIISKIEKLIAFGHDPSKMEIVIVGGTFLFMPKDYQENFIKSCYDALNGI
DSKNLEEAKLNNEHAKIRNVGFTIETKPDYCKQKHVDAMLDYGITRIEIGVQSLQNRVYQ
IVNRGHNYNDVIESFQISKDAGYKIVAHMMPGLPTMTPEGDIADFKKLFEDPELRPDMLK
IYPSLVIENTPLYEEYKQGRYSPYSDQDMIKVLTEVKKNVPKWVRIMRVQREISPNEIIA
GPKSGNLRQIVQQNLSKQGISCKCIRCREAGLSNKKTNEQDIKLNRINYDSSNGKEVFLS
YEDSNESIYGFLRLRKPSNLAHRKEIGDNSCIVRELHVYGKSLKLGEKLENEIQHSGLGK
NLMKEAEKISKEEFDATKLLVISAVGTREYYQKIGYSLYGPYMTKSLNKE
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgaataaactagatgtgttattttcaactgcatgcactgaaataacccagaatcttttg
acaattaaagagccaactaaaaaacaagtaaaggcagaaattaaaaaaatatgtgcaaaa
tatgcactagaaagaattccaagaaatcatgaaattctttcaactgtaaaagatactgat
tttttcaaattacaaaaagttttgttaaaaaaaccaatcaagacggcatctggagtatca
gtgattgcattgatgccaaaaccttatgcatgtcctcatggaagatgtacgtattgtcca
ggcggaatagaattcaattcgccaaatagctacactgggaaagaaccatcaacacttaac
gcaatacaaaatgaatatgatcctaaactgcagataatatcaaaaattgaaaaattaatt
gcttttggacatgatccatctaaaatggaaatagtaattgtaggaggaacatttttgttc
atgccaaaagactatcaagagaattttatcaaatcttgctatgatgcgttaaatggaatt
gattcaaaaaatttggaggaagctaaattaaacaacgaacatgcaaaaataagaaacgta
ggatttacaattgagacaaaaccagactattgcaagcaaaaacatgttgatgcaatgtta
gattacggaattactagaatagagataggagtacaatcattacaaaacagagtataccaa
attgtcaatagaggacataattacaatgatgtcatagaatcatttcaaatttctaaagat
gcaggatataaaattgtagcacatatgatgcctggacttcctacaatgacaccagaagga
gatattgcagattttaaaaaattgtttgaagacccagaacttagaccagacatgttaaaa
atttacccatcactagtaattgagaacacaccactctatgaggaatacaaacaaggaaga
tactcaccatactctgatcaagatatgatcaaagttctaactgaagtaaagaaaaacgtt
ccaaaatgggtcagaataatgagagttcaaagagagatatcaccaaatgaaatcatagca
ggtccaaaatcaggaaatctcagacaaatagtacaacaaaatctaagtaagcaaggcatt
tcatgtaaatgcatcagatgcagagaggcaggactatcaaacaaaaaaactaacgaacaa
gatataaaattaaacagaattaattatgattcatcaaatggaaaagaagtatttttgtca
tatgaagattcaaatgaatcaatttatgggtttttgagattaagaaaaccaagcaatctt
gcacatagaaaagaaattggagataattcttgtattgtacgcgaattacatgtgtatggt
aaatcattgaagcttggagaaaaattagaaaatgagattcagcattcaggattggggaaa
aatttaatgaaagaggctgaaaaaatttccaaagaagaatttgatgctacaaaactacta
gtaattagtgctgtaggaacaagagaatattatcaaaaaatagggtattcgttatatggg
ccatacatgacaaaatcgttgaataaagaatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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