KEGG   Nitrincola iocasae: F5I99_16430
Entry
F5I99_16430       CDS       T06212                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
nik  Nitrincola iocasae
Pathway
nik03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nik00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    F5I99_16430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nik03400]
    F5I99_16430
Enzymes [BR:nik01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F5I99_16430
DNA repair and recombination proteins [BR:nik03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     F5I99_16430
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_30 zinc-ribbons_6 HypA ADDB_N T2SSE AAA_19 zf-CHY PIF1 AAA_16
Other DBs
NCBI-ProteinID: QEW07946
UniProt: A0A5J6LI26
Position
3551879..3554086
AA seq 735 aa
MILRVAIPTPLHRLFDYRPPLSGTLKPQVGCRVSVPFGQRKVIGIITALPEHSELPLDKL
KPAHIILDAAPVLDGLQFYLARWAASYYAYPEGDALSQALPALLRKGEPAEFTHETLWRA
TPGASLDALSKSATRQRELLALLLRNPKGVSTDLLRVESLPVPLLKTLKDKALAETFIHH
PTPLHADEREEGEILKEAPLTLNTEQHQALQNIAAGSGFNTLLLEGITGSGKTEVYLQAI
QQVLKEGKQALILVPEIGLTPQTLARFKARFQVPVIALHSGLTDRQRLDAWLMAREGSAR
ILIGTRSAIFTPMRYPGLIIVDEEHDQSFKQQDGFRYSARDLAVLRAKHEDIALVLGSAT
PSLESLHNALSGRYRHSLLTTRAGKAMPPAFELLDIRGETLNCGLSDSLTQRIETHLAQG
TQILIFLNRRGFSPSLICHNCGAVNECTRCDARMTLHRSPPHMHCHHCDRQTPIPMRCNQ
CGSEDLRPSGAGTERTEDFLCHRFPKTPVLRIDRDSTARKNAMSQLMAQIHTGKPCIMIG
TQMLAKGHHFPRVTLVAVLDADSGLFSADFRGMEKTAQLVLQVAGRAGRADHPGEVVMQT
RHPDHPMLNALIRDGYGAFAASELQMRKAAGLPPFSFHALIRAEATRQGWAEGFLRDIRE
MMEEQLAAPSGSHWSGPFPSPMEKRAGLYRAQLLIQSRQRSDLHQLLMRILTFLIQHKAR
NKVRWSIDVDPLDSY
NT seq 2208 nt   +upstreamnt  +downstreamnt
ttgattcttagagttgccatccccacccccttacaccggctatttgactaccggcctccc
ctttccggtactctgaaacctcaggtcggatgccgcgtaagtgtaccgtttggccagcgc
aaggtgattggcatcatcacggcactgccagagcattcagagctacccctggacaagctc
aaacctgcgcatatcattctggacgccgcaccagtgctcgacggcctgcagttttattta
gcccgctgggccgctagttattatgcctatccggaaggtgacgccctgtctcaggcctta
ccggcgttgctgcgcaaaggcgaacctgccgaatttacccatgaaaccctctggcgggcc
acaccgggcgccagcctggatgcgctatcgaaatcggctacgcgtcagcgtgaactgcta
gccctactgctacgcaaccccaaaggggtcagcactgacttgttgagagttgaatctctg
ccagtacccttattgaaaacccttaaggacaaagccctggctgaaacgttcattcatcac
cctacccctctgcatgccgatgagcgtgaagagggcgagatattaaaagaagccccgcta
acactgaatactgagcaacaccaagcgttacagaacattgccgccggatcagggtttaat
acactgttactcgaagggatcaccggctcaggcaaaaccgaggtttacctgcaagccatc
cagcaagtactcaaagaaggcaagcaagcactgattctggtccctgaaatcggcctgact
ccgcagacactggcacgtttcaaagcccgctttcaggtgccagtaatcgccctgcactcc
gggctgactgaccgacaacgtctggatgcctggttgatggcacgagagggcagcgctcgc
atcctaattggcacccgctcagccatttttaccccgatgcgatacccaggtctgatcatt
gtcgatgaggagcatgaccaatcctttaaacagcaggatggctttcgttactcagcccgc
gacctggccgtgctgcgtgccaaacatgaagacattgcgctggtattgggcagtgccaca
ccatcactcgaaagtctgcacaatgcactcagtggtcgttatcgtcacagcctgctgact
acccgggctggcaaggcgatgccacccgcttttgaactactggatattcgtggtgaaacc
ctcaattgcggcttgtccgacagcctcacacaacgtattgaaacccatctggcacagggc
acccagatactgatttttctcaatcgccgtggtttttcgccctcactcatctgtcacaat
tgtggtgctgtgaatgaatgcacccgttgtgatgcccgcatgacactgcaccgctcacca
ccgcacatgcattgccaccactgtgaccgccagactcccatacctatgcgttgcaatcaa
tgtggcagcgaagacttacgaccatccggtgcgggcactgagcgcaccgaagacttcctg
tgtcatcgcttccccaaaacccccgtactgagaattgatcgtgacagcaccgcacgcaaa
aatgccatgagccaactgatggctcagatccatacgggcaaaccgtgcattatgattggt
acgcagatgctggctaagggtcaccacttcccccgcgtcactctggtggctgtattagat
gcagacagcgggttattcagcgctgattttcgtggtatggaaaaaactgcgcagttagtt
ttacaagtagccgggcgggcgggacgggccgaccacccaggtgaggtggttatgcagact
cgccacccggatcaccccatgcttaacgccctgattcgtgacggttatggtgctttcgcc
gcctctgagctgcagatgcgcaaagcagcaggcctgcctcccttcagttttcacgcattg
attcgtgccgaggcgacacgtcagggctgggcagaaggctttctgcgcgacatacgagaa
atgatggaagagcaactggccgcaccatcgggcagccactggtccggtccgtttccgtcg
ccaatggaaaagcgtgccgggctgtaccgggcgcaattactgattcaaagccgccagcgc
agtgacctgcaccagttacttatgcgcatactgacatttttaattcagcacaaagcgcgc
aacaaggtgcgctggtcaattgatgtcgatccactagacagttattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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