KEGG   Candidatus Nitrotoga sp. AM1P: W01_11000
Entry
W01_11000         CDS       T06613                                 
Name
(GenBank) efflux transporter outer membrane subunit
  KO
K18139  outer membrane protein, multidrug efflux system
Organism
nim  Candidatus Nitrotoga sp. AM1P
Pathway
nim01501  beta-Lactam resistance
nim02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nim00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    W01_11000
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    W01_11000
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:nim02000]
    W01_11000
   01504 Antimicrobial resistance genes [BR:nim01504]
    W01_11000
Transporters [BR:nim02000]
 Other transporters
  Pores ion channels [TC:1]
   W01_11000
Antimicrobial resistance genes [BR:nim01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    W01_11000
   Multidrug resistance, efflux pump MexJK-OprM [MD:M00642]
    W01_11000
   Multidrug resistance, efflux pump MexXY-OprM [MD:M00643]
    W01_11000
SSDB
Motif
Pfam: OEP DUF6847
Other DBs
NCBI-ProteinID: BBJ23173
UniProt: A0A455XBZ6
Position
complement(1279567..1281006)
AA seq 479 aa
MTTKTKTFQFMTLGVLGLMLQACSTPEVIIKKEDTRLPAGYKAGVSDQTNTASIKWKDFF
DDPNLLSLIDIAVVNNKEINIMMQRISVAQNEIQARRGQYLPFVNIGAGAGGDKKGQFTR
NGAIEENLPIAHGRAFPTYLGDYHFGLFSTWEIDVWKKLRNAKQVAVLEYMASKEGKNFL
VTNLVAEVAHSYYELLALDNQLNNLEQNISIQQNGLDMVKQLQLYARTTALAVRRYEAEV
AKNKSKVYELNQNITVVENRINFLLGRTPQLIQRASSGFMELKPKVLKTGIPSQLLQNRP
DIRQAELELSAAALNIKVARANFYPSFSINTGIGYEAFALKYLINTPESLAASIAGELVA
PLINKNAIIAEYKNANAKQIQAAYEYEQSIIKAYTEVANQISNIDNLDKNYQLKTSQVEA
LAQSIEVANQLFKSARVDYLDVLLAQRDTLDAKKDLIETKQKQIDAMVDLYKSLGGGWQ
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgacaacgaaaactaaaacatttcagtttatgaccttaggcgtgttgggtctgatgttg
caggcctgtagtactcctgaggtaataatcaaaaaagaagacacgcgtcttcctgctggt
tataaagcgggtgtttcggaccagaccaatacggcgagtattaaatggaaagattttttc
gatgatcctaatttattaagtttgatagatatagctgttgttaacaataaagaaattaac
atcatgatgcagcgcatcagtgttgcacagaatgaaattcaagcgcgtagaggccaatat
ttgccatttgtaaatattggtgctggtgcaggcggggacaaaaagggccagtttacgcgc
aatggcgctattgaagagaatctgccaatagcccatggccgagccttccctacatacctg
ggcgattatcactttgggttattttcaacctgggagatagacgtatggaaaaagttgaga
aatgcgaaacaggtcgctgttctcgagtatatggcatcaaaagaaggcaaaaattttttg
gtgactaacctggttgctgaagttgcccattcgtactatgaactgcttgccttggacaac
cagcttaataatttagagcaaaatattagtatccagcaaaatggtttggatatggtcaag
caactacagctatatgcaagaacaactgcacttgctgtcagacgttatgaagcagaagtg
gcaaaaaacaaaagcaaagtatacgaattaaatcaaaatattactgttgttgaaaaccgg
ataaatttcttgttagggagaacgccgcagcttatccagcgtgcttccagtggttttatg
gagcttaaacccaaggtgcttaagacaggtattccgtcacaattgctacaaaacaggcct
gatattaggcaagcggaacttgagctatcggcagcggcattaaacataaaggtggctagg
gcaaatttctatccctcctttagtataaacactggaatagggtatgaggcttttgcactt
aaatacctcatcaatactccagagtcattggcggccagtattgccggagaattagtcgcg
ccactgattaataaaaatgccatcatagcggaatataaaaacgccaatgccaagcagatt
caggcggcttatgagtatgagcaaagcattattaaagcttatactgaagtagcgaatcaa
atttcaaatatcgataacctcgacaaaaactatcagcttaagacaagccaagtggaagcg
ctcgcccaatcaattgaggtcgctaaccagctattcaaatctgcccgtgtggactatctg
gatgtgctattggcacaaagggataccttggatgccaaaaaagatttaattgaaacgaaa
caaaaacaaattgacgcaatggtggatctttataagtcattgggtggagggtggcagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (2)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system