KEGG   Candidatus Nitrotoga sp. AM1P: W01_19100
Entry
W01_19100         CDS       T06613                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
nim  Candidatus Nitrotoga sp. AM1P
Pathway
nim00550  Peptidoglycan biosynthesis
nim01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:nim00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    W01_19100
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:nim01002]
    W01_19100
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:nim01011]
    W01_19100
Enzymes [BR:nim01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     W01_19100
Peptidases and inhibitors [BR:nim01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   W01_19100
Peptidoglycan biosynthesis and degradation proteins [BR:nim01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   W01_19100
SSDB
Motif
Pfam: Peptidase_S13 Beta-lactamase2
Other DBs
NCBI-ProteinID: BBJ23983
UniProt: A0A455XDH3
Position
2178052..2179449
AA seq 465 aa
MKLLHTLLFIFCILPSTHAATLPPSVVKALQLAHIPLDSIGVEVREVNARTPLISVNAKQ
SMNPASTMKLLTTYAGLELLGPSYSWKTEAYLDGKLEQDVLHGDLILKGYGDPKLTLEKL
WLWLHELRSRGLREIRGDLVLDRSVFQLAPHDPAEFDNEPMRPYNTGPDALLLNFNSVRL
RFIPEGEKIKIISMPELAGIRLDNRVTAATVLVNCSDWNDALSMQLQGDTLRVQGVFPAQ
CGERERHVSLLSHPSYLYAVFRVLWQEMGGVLQGTLRESTVPGSATLFATHHSAPLAELI
RDINKFSNNVMARQLFLSLGRTAETSANVTYSELTIRNWLTQKKLYFPELILENGAGLSR
RERISPRSLALLLSSAQRSPLSTEFEASLPIVGVDGTFKKRLTDSEAANHAHLKTGSLEG
VQAVAGYVQSRSGKQWILVFLINHPNAAAGQQAQNALIEWVQRRY
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaagctgcttcacaccttgctatttattttttgtattctccccagtactcacgcagcc
acgctgccaccatcagtggtgaaagcgctacagctagcacatattccgcttgacagtatc
ggtgttgaggtacgcgaggtaaatgcgcgcacgccgctcatcagtgtgaatgcgaagcag
tcgatgaatccggcctcaaccatgaagctgctcactacgtacgccgggctggagttgcta
ggcccttcatatagctggaagaccgaggcatatctcgacggcaagctggaacaagatgtg
ctgcacggcgacctgatcctgaagggttacggcgatcccaagttgacgctggaaaaatta
tggctgtggctacatgagctgcgtagtcgcggtctgcgtgaaatccgtggcgatctggtg
ctggatcgtagtgtattccagctcgctccgcacgatcccgcggaatttgataatgagccg
atgcgtccctacaacacgggaccggacgcgttgttgcttaatttcaactctgtgcgcctg
cgctttattccagagggcgaaaaaatcaagattatcagcatgccggaactagcaggcatt
aggctggacaaccgcgttacagcagcaaccgtactagtaaattgcagcgactggaatgat
gcgctgtccatgcaattgcaaggcgatacgctacgtgtgcaaggtgtttttccggcccag
tgcggtgagcgtgagcgacatgtcagcctgctgtcccacccaagctatctgtatgccgta
tttcgtgtgttgtggcaagagatggggggcgtgctgcagggtacattgcgtgagagtaca
gttccaggtagtgcgactctgttcgccacgcaccattctgcgccattagctgaactgatt
cgcgatattaacaaattcagcaacaatgtcatggcgcgtcaactttttctaagtttgggc
aggactgccgagacatccgccaatgtcacctacagcgagctaactatacgcaattggctg
acacaaaaaaaactgtactttccggagttgatactggaaaacggtgccggactttcgcgt
cgagaacggatcagtccgcgcagtttggcattgttattgagtagcgcgcagcgcagcccg
ttatcaacggaattcgaggcctccttacctatcgttggggttgatggtacctttaaaaaa
cgcctcacggacagtgaagctgccaaccacgctcatctaaaaacgggttcgctggaaggc
gtgcaagccgttgccggttatgtgcaatcccgtagcggaaagcaatggattttggttttt
ttaatcaaccatcccaatgccgcagcagggcagcaggcacaaaacgcgctaattgagtgg
gtacaacgacgatattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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