KEGG   Candidatus Nitrosopumilus sediminis: NSED_00830Help
Entry
NSED_00830        CDS       T02303                                 

Definition
(GenBank) CoA-binding domain-containing protein
  KO
K18593  4-hydroxybutyrate---CoA ligase (ADP-forming) [EC:6.2.1.56]
Organism
nir  Candidatus Nitrosopumilus sediminis
Pathway
nir00720  Carbon fixation pathways in prokaryotes
nir01100  Metabolic pathways
nir01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:nir00001]
 09100 Metabolism
  09102 Energy metabolism
   00720 Carbon fixation pathways in prokaryotes
    NSED_00830
Enzymes [BR:nir01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.56  4-hydroxybutyrate---CoA ligase (ADP-forming)
     NSED_00830
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: ATP-grasp_5 Succ_CoA_lig CoA_binding_2 CoA_binding ATP-grasp_2 CPSase_L_D2 ATP-grasp Dak1_2
Motif
Other DBs
NCBI-ProteinID: AFS81978
UniProt: K0B782
Position
142006..144102
Genome map
AA seq 698 aa AA seqDB search
MAESVFLSPKSIAVIGASDKRGSVGATITSNIMNGFKGTVFPISPSRDTVFYKKAYKSVL
DVPKSIDLAVIVIKNTLVAPVLEECGKKKVKGVIIITAGFKEVDEEGARREQEIKDIAKK
YKIQIIGPNCLGVMNLDPKTMMNSTFLKVTPKSGKIALVSQSGAICAALVEDASAQGIGF
SAVVSLGNKAAMSEVDILKILANHKQTKVIVMYLEDMGDGQEFLKVCKNITKKLKKPVLV
LKSGRSPEGAKAAMSHTGALMGSDEIYDALLKQSGAIRVDTMEELFDYATAFSKQPLPTA
GGLVIVSNAGGPAIISTDACSKAGIRMAKIDSIRSKIDEVIPPWGSSRNPVDIVGDADFN
RFHNVLDRVLKHPKVGSVITMCTPSGTLNYDKLAEVIVEMSKKYKKTMLASLMGLDEGIT
NREILSKGDVPYYTYAEGAIRTLAAMIKFAIWVNTKEGRITKFKVNKAKAKKIFDKVKKE
KRPNLLEEEGQEVLKAYGLPLPQSALAKNETEAIKIAKKIGYPVVMKIASPQIIHKSDAG
GVKVNLNNDAEIKDAFKTIIKNAKKYNKNAEIKGVLIVEMVKGGKELIIGSKLEPGFGPV
IMLGMGGIYVEVLKDVTFKLAPVTDKEADDMIASIKTQKLLQGVRGEKPSDITKLSECIQ
RLSQLVSDFKEIKELDMNPVLVMEKGKGCRILDVRIGL
NT seq 2097 nt NT seq  +upstreamnt  +downstreamnt
atggcagaatctgtctttttatcaccaaaatcaattgcagtaattggtgcatctgacaag
agaggaagtgttggagctacaattacgtcaaatattatgaacggtttcaaaggaactgtt
tttccaattagtccctcaagggatactgtcttttacaaaaaagcatacaagagtgtttta
gatgttccaaaatcaattgatcttgcagtaatcgtcattaaaaatacgttagttgcacca
gtgttagaagaatgtggaaagaaaaaagtcaaaggcgttatcattatcacagctggcttc
aaagaagttgatgaagaaggagctagacgtgaacaagaaataaaagatattgctaaaaaa
tacaaaatccaaatcatcggacctaattgtcttggtgtcatgaatcttgatccaaagaca
atgatgaattctacttttcttaaagttacaccaaagtcaggaaaaattgcattggtatct
cagagtggcgcaatctgtgcagcactagttgaagatgcaagtgctcaaggaattggtttt
tctgctgttgtaagtcttggaaataaagctgcaatgagtgaggttgacatcctaaaaatt
cttgcaaatcataaacaaaccaaagttattgtgatgtatcttgaagacatgggagatggt
caagaattcctcaaagtttgtaaaaatattactaaaaaactcaaaaaaccagtacttgta
ctaaaatctggacgtagtccagagggtgcaaaagctgcaatgtctcatactggagctttg
atgggttcagatgaaatctatgatgctcttcttaaacaatcaggcgcaatcagagttgat
actatggaagaattatttgattatgcaacagcattttcaaaacaaccacttccaacagca
ggtggtttagttattgtatcaaatgctggagggcctgcaataatttccactgatgcatgt
tctaaagctggaattagaatggcaaagattgatagtattcgttcaaagattgatgaagta
attcctccttgggggagctctagaaacccagttgacattgtaggtgatgctgattttaac
agattccataacgtgttggatcgtgtactgaaacatccgaaggtaggatctgtgattact
atgtgtacaccttctggaactctgaattatgataaacttgctgaagttattgttgaaatg
tcaaagaaatacaaaaaaacaatgcttgcaagcttgatgggattggatgaaggcattaca
aatagagaaattttatccaaaggagatgttccttattacacatacgctgaaggagcaatt
agaactttagctgcaatgataaagtttgcaatttgggtaaataccaaagaaggaagaatc
acaaaattcaaagtaaacaaagctaaagcaaagaaaatttttgacaaagtcaaaaaagaa
aaaagacccaatctgttagaagaagaaggacaagaagttctcaaagcatatggcttaccc
ttgcctcaaagtgcacttgccaaaaatgaaacagaagcaataaaaattgccaaaaaaatt
ggttatcctgttgtaatgaaaattgcatcacctcaaattattcacaagtctgatgctggt
ggtgttaaagtaaacttgaacaatgatgctgaaatcaaagatgcattcaaaaccattatc
aaaaacgccaaaaaatacaacaaaaatgcagagatcaaaggagtcttgattgtagagatg
gtaaaaggtggcaaagaactcattattggttcaaaacttgaaccaggatttggtcctgta
attatgcttggaatgggtggaatctatgtcgaagttcttaaagatgtaacattcaagctt
gcacctgtaactgataaggaggctgatgatatgatagcctcaattaaaactcaaaaacta
ctacaaggtgtgagaggagaaaaaccatctgatatcacaaaattatctgagtgtattcaa
agactatcccaattagtttctgactttaaagagattaaagaattagacatgaaccctgtt
ctagtaatggagaaaggaaaaggctgtagaattcttgatgtcagaattggactttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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