KEGG   Nitrosomonas sp. AL212: NAL212_0109
Entry
NAL212_0109       CDS       T01443                                 
Name
(GenBank) conjugation TrbI family protein
  KO
K20533  type IV secretion system protein TrbI
Organism
nit  Nitrosomonas sp. AL212
Pathway
nit02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nit00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NAL212_0109
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nit02044]
    NAL212_0109
Secretion system [BR:nit02044]
 Type IV secretion system
  Trb secretion system protein
   NAL212_0109
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: ADZ28053
UniProt: F0TD63
Position
pNAL21202:complement(8762..10153)
AA seq 463 aa
MATNSKLLSPDSSPDVVARSAGVRRVNNLPIVIFGAIMLIFMLLMMIVAMNRAAERGQYD
SDVNGDIQSSNSFASLIAKDYIGGIIEPKAQSVTSDSPAKSPIQGIIIERPSDLDKPPLP
PSLNAVTDPSHHADIEHIRMLKRQQLEEAIKAKTNVNVIAPRSTGSSPDLTNAGAPRTRE
EMLAKLASVRQQIDANLREDPTAAYHARLAQLQGRGLGAGRGDEFMDDGAPRLLDDDVGR
QSQDYSRFDSAKGDARWNLDSEVKKPPTPYVLQTGFVIPATLISGINSSLPGQIMAQVSQ
HIYDSPIGKWRLIPQGSRLVGTYSSEVEFGQARVLVAWQRIIFPDGKTMDIGAMPGADGV
GYSGFRDQVNNHYLRIFGSALIMSAIVAGSTYSQRDSGGAFGRQNAGSIMSQSLGQQLGL
VTANLIRKNLNISPTLEIRPGYRFNIIVTKDMKFSKPYQSLDY
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggcgaccaattcaaaactcttatcacccgattcgtcaccggatgtagtcgcaagaagc
gccggtgtgcggcgcgttaataaccttccgattgttatttttggcgcgattatgctgata
ttcatgttgcttatgatgatcgtcgctatgaatcgcgcagctgagcgaggccaatacgat
tctgatgtgaatggcgatattcagtcgagcaattcctttgcttcactcattgccaaagac
tacatcggcggcatcatagaacctaaagcccaatctgtaacttcagattcacccgcaaaa
tcacccattcagggaatcattatcgagcggccatcggatctggataaaccgcctctgccg
ccatccctaaatgcagttactgatccctcgcatcatgctgacatcgagcatattcggatg
ctgaaacgccagcaactggaagaagcgatcaaggccaaaacaaatgtgaatgtgattgca
cccagaagtacaggatcatcgccggatttaaccaacgctggtgcacctagaacgcgcgag
gaaatgttggcaaaattggcatcagtgcgtcaacagatagatgcaaatctgcgtgaagat
ccaacggctgcgtatcatgcgcgcttagcgcagttgcagggcagggggttgggagcgggg
aggggtgatgaattcatggacgatggcgctcctcgtttgctggatgatgatgttggcaga
cagtctcaagattattctcgttttgattcggcaaaaggggatgcacgctggaatctggat
agtgaagtcaaaaaacctcccacaccgtatgtcttgcaaactgggtttgtcattccggca
accctgatatccggtattaattccagcttgccagggcagatcatggcacaggtgagtcag
catatttatgattccccgataggtaaatggcgcttgattccacaaggctcaagattggtg
ggtacgtattccagcgaggtggagtttggtcaggcacgtgtgctggtcgcttggcaacgt
atcatctttccggatggcaagaccatggatattggtgccatgccgggtgctgatggggtg
ggttattcgggatttcgcgatcaggtcaataaccattacctgcgcatctttggttcagcc
ttgattatgtcggccattgtggccggttcaacttacagtcagcgtgattcaggaggtgct
tttgggcggcaaaatgccggtagcatcatgagccaatcgctgggtcagcaattggggttg
gtgacagccaatcttatccgtaagaacctgaatatatccccaacgcttgaaatcaggccg
ggctatcgctttaacatcatcgttaccaaagatatgaagttttctaaaccctatcaatcg
cttgattattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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