KEGG   Nitrosomonas sp. AL212: NAL212_0518
Entry
NAL212_0518       CDS       T01443                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
nit  Nitrosomonas sp. AL212
Pathway
nit03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NAL212_0518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nit03400]
    NAL212_0518
Enzymes [BR:nit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NAL212_0518
DNA repair and recombination proteins [BR:nit03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NAL212_0518
    RecFOR pathway proteins
     NAL212_0518
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 Mg_chelatase nSTAND3 Rad17 AAA_3 AAA_22 AAA_14 AAA_18 AAA_33 DUF815 AAA_2 TsaE RNA_helicase AAA_17 NTPase_1 IstB_IS21 AAA_28 NB-ARC AAA_24 NACHT bpMoxR Sigma54_activ_2 TniB AAA_19 ABC_tran AAA_25
Other DBs
NCBI-ProteinID: ADZ25463
UniProt: F9ZDH2
Position
403603..404649
AA seq 348 aa
MIETDRLITAISSSSQEEILERALRPTQLDEYVGQEKIRGQLQIFIEAARNRREALDHVL
LFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAALLTNLEPNDVLFIDEIHRLS
PIVEEILYPALEDYQLDIMIGEGPAARSVKLDLPSFTLVGATTRAGMLTNPLRDRFGIVS
RLEFYTSEELGKIVTRSAGLLKVEISSDGALEIACRSRGTPRIVNRLLRRVRDYAQVKAD
GHITRLVADAALSMLDVDAIGLDVMDRKLLLAVLEKFSGGPVGVDNLAAAISEERDTIED
VLEPYLIQQGFLKRTARGRVATTAAYQHFGIAQLSGGLSGELWEERNL
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgattgaaacagatcggcttataactgctatttcctcgtcttcacaagaagaaatatta
gagcgagcattacgtcctacacagcttgatgagtatgtcggtcaggaaaaaattcgtgga
caattgcagatattcattgaagccgcaaggaatcgacgtgaggccctcgatcatgtttta
ttattcgggccgcccggattaggtaagacgacacttgcgcatattattgccagagaaatg
ggcgttaatctgcgacaaacttctggcccggtactggagcgcccaggtgatttggcggct
ctattgactaatctggaacctaatgatgtcctgtttatcgatgaaattcatcgcctttca
ccgatagtagaagaaattctttatccagctctggaagactatcaattggatattatgata
ggagaagggccagcggctcggtctgtgaagctcgacttgccttcatttaccctggtaggt
gcaacgacgcgcgctggcatgcttacaaatccattgcgtgatcggttcggtattgtgtca
cgcttagagttttatacatcggaagaacttggcaaaatagtgactcgttctgccgggttg
ttaaaagtagagatttcatctgatggcgcactggagattgcttgccgttcgcgtggcaca
ccacgaattgttaatcggttactacgccgcgtacgcgattatgcacaagtgaaggcggat
gggcatattactcgtcttgtggcagatgccgctttgagcatgttggacgtcgacgcgatc
ggattggatgtcatggaccggaaactgttgttagcagtattagaaaagtttagtggcggt
ccagtcggggttgataatctcgctgctgcgattagtgaagagcgcgacacaattgaagat
gtgctagagccttacttaattcagcaaggatttctgaagcgtacagctcgaggacgtgta
gcaacgacagcggcttatcagcattttggtattgcacagctaagtggcggattaagcggt
gaactttgggaagaaagaaatttataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (32)   
   Pfam (32)   
All databases (42)   

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