KEGG   Candidatus Nitrosopumilus sp. SW: Nisw_01865
Entry
Nisw_01865        CDS       T06175                                 
Name
(GenBank) TATA box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
niw  Candidatus Nitrosopumilus sp. SW
Pathway
niw03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:niw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Nisw_01865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:niw03000]
    Nisw_01865
   03021 Transcription machinery [BR:niw03021]
    Nisw_01865
Transcription factors [BR:niw03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    Nisw_01865
Transcription machinery [BR:niw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     Nisw_01865
  RNA polymerase III system
    TFIIIB
     Nisw_01865
  RNA polymerase I system
    SL1/TIF-1B
     Nisw_01865
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-ProteinID: QDI88365
UniProt: A0A514L9Z0
Position
297709..298269
AA seq 186 aa
MPQTKPIVSVENVVASASVDQKMDLNEITRTFPDVEYHPDQFPGLVFRLKSPKTATLIFT
SGKMVCTGSKSEEMARKAVKTVVQKLRKGGIKVKKDAVVEIQNIVASINLGGKIHLEQAA
RTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHALLEEK
DLMIYD
NT seq 561 nt   +upstreamnt  +downstreamnt
atgccacaaaccaaacctattgtaagtgttgaaaatgttgtagcttcagcatctgtagac
caaaagatggacttgaatgaaattacaagaacatttccagatgtagaatatcatcctgat
caatttccaggattagttttcagattaaagagtccaaaaactgcaacattaattttcact
tcaggtaaaatggtgtgtactggttctaaatcagaagagatggcaagaaaagctgtaaaa
acagttgtgcaaaaacttcgtaaaggtggaatcaaagttaagaaagatgcagttgtagaa
attcaaaatattgttgcatcaattaatcttggtggaaaaattcacttagaacaagctgca
agaacattgccaagaagtatgtacgaaccagaacaatttccaggacttattcatagaatg
ctagatcctaaaacagtcattttgttattttcctcaggaaaacttgtctgcacaggagca
aagaaagaaccagatgtttacagatctgtaaataacttacatgcattactagaagaaaaa
gatctaatgatttatgactag

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