KEGG   Candidatus Nitrosopumilus sp. SW: Nisw_07430
Entry
Nisw_07430        CDS       T06175                                 
Name
(GenBank) tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
niw  Candidatus Nitrosopumilus sp. SW
Brite
KEGG Orthology (KO) [BR:niw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:niw03016]
    Nisw_07430
Enzymes [BR:niw01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     Nisw_07430
Transfer RNA biogenesis [BR:niw03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    Nisw_07430
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM zf-PARP DUF416
Other DBs
NCBI-ProteinID: QDI89367
UniProt: A0A514LC32
Position
complement(1236925..1238193)
AA seq 422 aa
MAKIFVESYGCSASFADSEMISGLILNGGHTLVEDSSESDLNIVVTCSVKDATANKMIHR
IKSLKTKPLVVAGCLPKAEKETVEKFSQSASLLGPNSLGKTLQVIDSTLKGRKEIALEDS
DLSKVGLPKVRLNPAVGIVEIASGCMSECTFCQTKISKGDLQSYRLGDIVRQVKTEINEG
CKEVWLTSTDNGCYGFDIGTDLPSLINAVSEIPEEFMIRVGMMNPMYMPRIKEKLIESYD
NDKVFKFLHIPVQSGSDKVLHDMKRGHTAGTFREIVKKARERFPNFTISTDIIVGFPSET
KEDFEKTVELLDETRPDVVNLSKYSARPGTEAAEWEQIDVAEVKSRSKKIFEQINKISLE
NNKKWIGWKGNVLFDERTDEGIKGRNFAYKPVFVPEQVDIGQLQAVEIIEATQNSLLGKI
AS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcaaaaatatttgtagaatcttacggatgttctgcaagttttgcagactctgaaatg
atttcaggattaattctaaatggaggccatacgttagttgaggattcgtcagaatcagat
cttaacattgttgtaacatgttctgtaaaagatgcaacagcaaacaagatgattcatagg
ataaaatcactaaagacaaagcctctagtcgtagctggttgtctaccaaaagctgaaaaa
gaaactgtcgaaaagttttctcaaagtgccagtctacttggtccaaattctttaggtaaa
actctccaagtcattgattctacacttaaaggaagaaaagagattgcattagaagactct
gatttatcaaaagtgggattgccaaaagttaggttgaatccagcagtaggaatagttgag
attgcaagtggatgtatgagtgaatgtacattttgtcagactaaaatttcaaaaggagat
cttcaaagttacagactaggagacattgtaagacaagtaaaaacagagatcaatgaagga
tgtaaagaagtgtggttaacatcaactgataatggatgttatggatttgatattggaaca
gatttaccttctttaattaatgcagtctcagaaatccctgaagagtttatgatcagagta
ggaatgatgaatccaatgtacatgccacgaattaaagagaaattaattgaatcatatgat
aatgacaaagtcttcaagtttctccacatcccagtacaaagtggaagtgacaaggttttg
cacgacatgaaaaggggtcatactgctggaacattcagagagatagtaaaaaaggcaaga
gagagattcccaaactttaccatttcaacagacatcatagtaggatttccttcagagaca
aaagaagactttgagaaaacagtagaattgcttgatgagacaagaccagatgtggtaaat
ctttcaaaatacagtgccagaccaggaactgaagctgctgaatgggaacaaattgatgtt
gcagaagtaaaatcaagaagtaagaaaatttttgaacagatcaacaaaatatcgttagag
aacaacaaaaagtggatcggttggaaaggcaatgttctctttgatgaaaggacagacgag
ggaatcaaaggaagaaactttgcatacaagccggtgtttgtccctgaacaagtggacatt
gggcaattgcaagcagttgagatcattgaggctacacagaatagccttcttgggaagatc
gcaagctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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