KEGG   Nitratireductor mangrovi: FQ775_07515
Entry
FQ775_07515       CDS       T06518                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
niy  Nitratireductor mangrovi
Brite
KEGG Orthology (KO) [BR:niy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:niy03021]
    FQ775_07515
Transcription machinery [BR:niy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FQ775_07515
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_20 HTH_17 HTH_23 HTH_DeoR DUF4197
Other DBs
NCBI-ProteinID: QDZ00236
UniProt: A0A5B8KXK2
Position
4845480..4846187
AA seq 235 aa
MHTAVEQLASALTEDVPDTELARRAAQKDGAAFEAIMRRHNQLLFRTARGIVRSDGEAED
VAQEAWMQVWRSLSGFRSESKLSTWLVRITVNEALGRLRGKRSQIIPLEIAMMSSDNDTR
KALTEAPDRGPEHSVERSRLRALIEARIAVLPEVFRSVFMLRAIEEMSVDEVAEVLDIPA
ATVRTRYFRARALLRESLAQEMDVAIGEAFSFAGERCDRVVAGVMARARVEGLCK
NT seq 708 nt   +upstreamnt  +downstreamnt
atgcatacggccgtagagcaactagcatctgctttaacggaagatgttccggataccgaa
ctggccaggcgtgcagcacaaaaggacggtgccgccttcgaggcgatcatgcgtcgtcac
aaccagctcctgtttcgcacggcgcgcggtatcgtccgcagcgacggtgaagcagaagac
gtcgcacaggaagcatggatgcaggtttggcgctctctctcaggctttcggtcagaaagc
aagctctccacctggctggttcgcatcaccgtcaacgaggcgctgggtcggttgcgcggg
aagagatcgcagataattccactggagatagccatgatgtcgtccgacaacgacacacgg
aaggcgctgacggaggcgccggatcgcggaccggagcattcggtcgaacggtcccggctc
cgcgctctgatagaggcgcgcatcgcggttctgcccgaagtatttcgcagcgtcttcatg
cttcgcgcaatcgaggagatgagcgtcgatgaggtggcggaggtgttggacattcccgca
gccacagtccgcacacgctatttccgcgcccgtgcccttctgcgcgaaagccttgcgcag
gagatggatgtcgccatcggcgaggccttcagttttgccggtgagcgctgtgatcgcgtc
gtcgcgggcgtcatggctcgagcccgggtggaaggtctttgcaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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