KEGG   Nitratireductor mangrovi: FQ775_20625
Entry
FQ775_20625       CDS       T06518                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
niy  Nitratireductor mangrovi
Pathway
niy03030  DNA replication
niy03430  Mismatch repair
niy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:niy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FQ775_20625 (dnaE)
   03430 Mismatch repair
    FQ775_20625 (dnaE)
   03440 Homologous recombination
    FQ775_20625 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:niy03032]
    FQ775_20625 (dnaE)
   03400 DNA repair and recombination proteins [BR:niy03400]
    FQ775_20625 (dnaE)
Enzymes [BR:niy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FQ775_20625 (dnaE)
DNA replication proteins [BR:niy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FQ775_20625 (dnaE)
DNA repair and recombination proteins [BR:niy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FQ775_20625 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF655 T2SSK HROB HHH_3
Other DBs
NCBI-ProteinID: QDZ02583
UniProt: A0A5B8L448
Position
complement(1292224..1295751)
AA seq 1175 aa
MASERLPRDPLLREAMQAAAAPAAPARPFIHLRVHSAYSLLEGALPLAKIVGHAVRDTAP
AIAVADTNNLFGALEFAQKAVKDGVQPIIACQLDTLFEGEEATGSRSSRDNRPDLAALVL
IAADEQGYANLVRLVSRAYLDTPAGAPVHVTASWIAEHAAGVICLSGGPGGPVGRALAAD
HAPLAEQRILKLKEIFGDRLYVELQRYDGYDRAVEAATVELAYRHELPLVATNEAFFPTR
DDYEAHDALIAIAEGTVIAVDERRKLTPDHHLKSQAEMAALFADLPEAIDNTVEIALRCS
YFPKNRAPILPRFTAGSADDAEVAEKAEADELKRQAREGLAHRLETLGLSAGYGEDDYRQ
RLEHELAIIERMKYPGYFLIVADFIKWAKAHDIPVGPGRGSGAGSLVAYALTITDVDPLR
FSLLFERFLNPDRVSMPDFDIDFCQDRRDEVIRYVQEKYGRDQVAQIITFGTLQARAVLR
DVGRVLQMPYGLVDRLTKLVPANPANPVKLADAIAAEPRFAEETEKEPIVEQLLEIAQKL
EGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKKVEDAGLVKFDFLGLKT
LTVLETGVKLIRRKGIDVDLAKIPLADPDTYAMLSRGETVGIFQVESAGMRKALIGMKPD
CIEDIIALVALYRPGPMENIPTYNARKHGEEEMVSIHPKIDHLVKETQGVIVYQEQVMQI
AQELAGYTLGEADLLRRAMGKKIRAEMDKQRERFVTGAVERGVAKGQADFIFDLLAKFAD
YGFNKSHAAAYAIVSYQTAWMKAHHPVEFIAASMTLDMANTDKLADFRQDAIRLGIDVVA
PSVMTSHRDFEVGENRIFYSLAAIKGVGDAAVEHIVERRNEKPFASLEDFCERVDPRIVG
KRVLESLVQAGALDCFGRDRAAMFAGVELMMGLAQRAAENAISGQADIFGGALAGAPEPL
RLPAVDPWLPAERLHREFQAVGFYLSAHPLDEYRAALEKMRVQNWAEFSAAVKRGASAGR
LAGTVTSKQERKTRTGNKMGVVNFSDTTGQFEAVLFSETLAQYRDLLEAGTSVVITVAAE
DRPEGINLRIQTVQSLEDEASRLQKALRIYLRDSAPVSALANQLGQRGEGEVSLILIKAG
GAGEVEIALADRYRISPQIASALRAVPGVVEVELV
NT seq 3528 nt   +upstreamnt  +downstreamnt
atggcctccgaacgacttccccgcgatccgctgttgcgcgaggccatgcaggcggcggcc
gcgccggcggcccctgcccggcccttcatccatctgcgcgtccattcggcttattcgctg
ctcgaaggcgcgctgccgctggcgaagatcgtcggtcacgcggtcagggacacggcaccg
gcgatcgccgtcgccgacaccaacaacctgttcggggcgctggaatttgcccagaaggcg
gtcaaggacggtgtccagccgatcatcgcctgccagctcgacacgctgttcgagggtgag
gaggcgaccggctcgcgttcttcgcgcgacaaccgccccgacctcgccgctcttgtgctg
atcgccgccgacgagcagggctacgccaatctggtacggctggtgagccgggcctatctc
gacacgccggccggcgcgccggtccacgtgacggcctcctggatcgcggagcatgccgca
ggcgtcatctgcctttccggcggccccggcggcccggtcggacgggcgctggccgccgac
cacgcgccgctcgccgagcagcgaattttgaaactcaaggagatcttcggcgaccggctt
tacgtcgagctgcagcgctatgacggctacgaccgcgctgtcgaagcggcgaccgtcgaa
ctggcttaccgtcacgaactgccgctggtcgccaccaacgaagcgtttttcccgacccgc
gacgactacgaggcccatgacgcgctgatcgccatcgccgagggcacggtgatcgccgtc
gacgagcgtcgcaagctcacccccgaccaccacctgaaaagccaggccgagatggcagcg
ctcttcgccgacctgccggaggcgatcgacaatacggtcgagatcgcgctgcgctgctcc
tactttccgaagaaccgcgccccgatcctgccgcgtttcaccgccggctccgccgacgac
gccgaggttgccgagaaggccgaggccgacgagctcaagcgccaggcgcgcgaaggcctc
gcgcatcgccttgaaacgctggggctcagcgccggctacggcgaggacgactaccgccag
cgtctggaacacgagctcgccatcatcgagcgcatgaaatatccgggctacttcctgatc
gtcgccgacttcatcaaatgggccaaggcgcacgacattccggtcgggcccggtcgcggc
tcgggcgcgggctcgctggtcgcctatgcgctcaccatcaccgacgtcgacccgctgcgc
ttctcgctgctgttcgagcgcttcctcaaccccgaccgcgtctcgatgcccgacttcgac
atcgacttctgccaggaccggcgcgacgaggtgatccgctacgtccaggaaaaatacggc
cgcgaccaggtcgcgcagatcatcaccttcggaacgctgcaggcgcgcgccgtgctgcgc
gatgtcggccgcgtgcttcagatgccgtacgggctggtcgacaggctgacaaagctggtg
ccggccaatcccgccaacccggtcaagctcgccgacgcgatcgccgccgagccgcgcttt
gccgaggagacggagaaggagccgatcgtcgagcagcttctggagatcgcccagaagctc
gaggggctctaccgccacgcctccacccacgccgccggcatcgtcatcggcgaccgaccg
ctgtcggaactggtgccgatgtaccgcgacccgcgctccgacatgccggtcacccagttc
aacatgaaaaaggtcgaggacgccgggctggtcaagttcgacttcctcggcctgaagacg
ctgacggtgctggagaccggcgtaaaactcatccgccgcaagggcatcgacgtcgacctc
gccaagatcccgctcgccgatccggacacctacgccatgctgtcgcgcggcgagacggtc
ggcatcttccaggtggaatcggccggcatgcgcaaggcgctgatcggcatgaagcccgac
tgcatcgaggacatcatcgcgctggtcgcgctttatcggccgggcccgatggagaacatc
cccacctacaacgcccgcaagcacggcgaggaggagatggtctcgatccatcccaagatc
gaccatctggtgaaggagacgcaaggcgtcatcgtctaccaggagcaggtgatgcagatc
gcccaggagcttgccggctacacgctcggcgaagccgacctgctgcgccgcgccatgggc
aagaagatccgcgccgaaatggacaagcagcgcgagcgcttcgtcaccggcgcggtcgag
cgaggcgtggccaagggccaggccgatttcatcttcgaccttctggccaagttcgccgac
tacggcttcaacaagtcgcacgccgccgcctacgccatcgtctcctaccagaccgcctgg
atgaaggcgcatcacccggtcgagttcatcgccgcatcgatgacgctcgacatggcgaac
accgacaagctggccgacttccgccaggacgcgatccgcctcggaatcgacgtggtggct
ccctccgtcatgacctcgcatcgcgatttcgaggtcggcgaaaaccgcatcttctattcg
ctggccgccatcaagggcgtcggcgacgccgccgtcgagcacatcgtcgaacggcgcaac
gaaaagccgttcgcgagccttgaggatttctgcgagcgtgtcgacccgcgcatcgtcggc
aagcgggtgctggaaagcctcgtccaggccggcgcgctcgactgcttcggccgcgaccgc
gccgcgatgttcgccggcgtcgagctgatgatggggctcgcccagcgcgcggccgagaac
gcgatctccggccaggccgacatcttcggcggcgcgcttgccggcgcgcccgaaccgctg
cgcctgccggcggtcgatccgtggctgccggccgaacggctgcaccgcgagttccaggcc
gttggcttctacctgtcggcccatccgctcgacgaataccgcgccgcgctggaaaagatg
cgggtccagaactgggccgagttttccgcggcggtcaagcgcggcgcctcggccgggcgg
ttggccggcacggtcacctcgaagcaggagcgcaagacccgcaccggcaacaagatgggc
gtggtgaacttttccgacaccaccggccagttcgaggcggtgcttttttcagaaacgctg
gcgcaataccgcgacctgctcgaggccggcacctcggtcgtcatcacggttgcggccgag
gaccggccggagggcatcaatctgcgcatccagacggtacagtcgctggaagacgaggca
agccggctgcaaaaggcgctgcgcatctatctgcgcgattccgcgccggtctcggcgctc
gccaaccagctcggccagcgcggcgaaggcgaggtctcgctgatcctgatcaaggcgggc
ggcgccggcgaggtcgagatcgcgcttgccgaccgctaccgcatctcgccgcagatcgcc
tctgccctgcgcgccgtgcccggcgtggtcgaggtcgaactggtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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