KEGG   Nitrospira japonica: NSJP_1005
Entry
NSJP_1005         CDS       T05001                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
nja  Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:nja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nja03032]
    NSJP_1005 (gyrB)
   03400 DNA repair and recombination proteins [BR:nja03400]
    NSJP_1005 (gyrB)
Enzymes [BR:nja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NSJP_1005 (gyrB)
DNA replication proteins [BR:nja03032]
 Prokaryotic type
  DNA Topoisomerases
   NSJP_1005 (gyrB)
DNA repair and recombination proteins [BR:nja03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NSJP_1005 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_insert GyrB_hook
Other DBs
NCBI-ProteinID: SLM47177
UniProt: A0A1W1I2F7
Position
I:941527..944016
AA seq 829 aa
MATKESDEIAGEPSSRKSDSYSADQIKVLEGLDAVRKRPAMYIGSTGPDGLHHLVYEVVD
NSVDEHMAGFGEAIEVTVHIDGSVTVVDNGRGIPTGMHPTQKKSAAEVALTVLHAGGKFE
QGAYTVSGGLHGVGISVVNALSEWLELEIWQDGQVFEQRYERGKPGAPLKDTGKTKRRGT
KVRFKPDGQIFETLEFSFDVLAQRLRELAFLNKGLSIALKDERKEPAKEQTFLYKGGIVS
FVEHLNEAKTPLHKPIYVNVEKEKMILEVALQYNDSYAENLFSFANNINTKEGGTHLVGF
KAALTRTINNYANANDLLKKETESLTGDDVREGLTAVVSVKVRNPQFEGQTKAKLGNSEV
KGVVEAAVNEALGTYFEENPPVARKIIGKAIDAARAREAARKAKDLIRRKSALDGGSLPG
KLADCSEKDPSVSELYIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARFDKMLTSD
EIRTLIMALGTGIGRKREESDKADKDTFDIAKARYHKIILMTDADVDGSHIRTLLLTFFF
RQMPELLERGYVYIAQPPLFKVKKGKAERYLKDEGALNEHLADLAVEDVELYLEGAQGFV
TGRRLLPILKKMIAFETLLARLNKKSHEAAMLRAFVDEPGLDRDLLKNQETLVQVVANVK
RALALIFPKLAPTLDILQDEEHQSNRVSCRLQASGIAHALEVTHELVGSADFRELQKLAP
SAIGLGRLPYRLKSKGQEQQLHSTADLVKTILDLGKQGLSIQRYKGLGEMNPEQLWETTM
NPEVRTLLKVKLEDMTGVDEIFTILMGDEVEPRRNFIQAHALEVRNLDV
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggccacgaaagaatctgacgagatagcaggcgaaccgagctcgcggaagtccgacagt
tacagcgcggaccagatcaaggtcctggaaggcctcgacgcagtccgcaagcgtccggcg
atgtatatcggcagtaccgggccggatgggctgcatcatctggtctacgaggtcgtcgat
aacagcgtcgacgaacatatggccgggttcggggaagcgatcgaggtcacggtgcacatc
gacggcagcgtgaccgtggtcgacaacgggcgcggtattcccaccggcatgcatcccacc
caaaagaagtccgccgccgaggtggcgctcacggtgctccacgcgggcggcaagttcgag
cagggtgcctataccgtatccggaggattgcacggcgtcggcatctcggtcgtgaacgcg
ctctcagaatggctcgagctggagatttggcaggacggccaggtctttgaacaacgctat
gaacgaggcaagcccggcgcgccgctgaaggacacggggaaaacgaagcgccggggcacc
aaggtccggttcaagccagacggacagattttcgagacgctggagttcagtttcgacgtg
ctggcacagcgactgcgcgaactcgccttcctcaacaagggtctttcgatcgccctgaag
gacgagcgcaaggaaccggccaaggaacagaccttcctgtacaagggcggcatcgtctcg
ttcgtcgagcacttgaacgaagccaagacccccctgcacaagccgatctatgtgaacgtc
gaaaaagagaagatgatcctggaagtggcgctccagtacaacgacagctatgcggaaaac
ctcttctccttcgcgaacaacatcaatacgaaggaagggggcacccatctggtcgggttc
aaggccgcgctgacgaggacgatcaacaactacgccaatgccaatgaccttctcaagaaa
gagacggagtcgctcacgggcgatgacgtgcgcgagggcctcacggccgtcgtgagcgtg
aaggtccgtaatccccagttcgaagggcagacgaaagccaagctcggcaacagcgaagtg
aagggggtcgtcgaagccgccgtcaatgaggcactgggaacctatttcgaggaaaatcct
ccggtcgcccgcaagatcatcggcaaggccatcgacgccgcccgtgcccgcgaggctgcc
cgaaaggcgaaggatctcatccggcgcaagagcgcgctcgacggaggatcgctgcccggc
aagttggcggattgttcagaaaaagacccgtcggtcagcgaactctacatcgtcgagggt
gattcggccggcggctcagccaagcaaggccgagaccggaaattccaggccatcttgccg
ttgaaggggaagatcctcaacgtcgaaaaggcgcgcttcgacaagatgctcaccagcgac
gaaatccgcacgctcatcatggctttaggcaccggcatcgggcgcaagcgggaggagagc
gacaaagccgacaaggataccttcgacatcgcgaaagcccgataccacaagattattctc
atgaccgacgcggacgtggacggcagccacatccggacgctgctgctgacgttcttcttc
cgacaaatgcccgagctgttggagcggggctacgtgtacatcgcacagccgccgctcttc
aaggtgaagaagggcaaggccgagcggtatctgaaagacgagggggcactgaacgagcat
ttggcggatcttgccgtcgaggacgtcgagctctatttggaaggggcccagggtttcgtc
acggggcggcgcctgctgccgattctcaagaagatgatcgcattcgaaacgttgctcgcg
cggttgaacaagaaatcccatgaagccgcgatgctccgggccttcgtcgacgagcctggg
ctggatcgggatttgctgaagaaccaggagacccttgtccaggtcgtggcgaacgtgaag
agggcgcttgccctgatctttcccaaactcgcgcccacgctcgacatccttcaggacgag
gaacatcaatcgaaccgggtgtcctgccgacttcaggccagcgggatcgcccatgctctc
gaagtgacccatgagctggtcggctccgccgacttccgggaactgcagaagctggcgccc
tccgccatcggcctcggccgtctgccctaccgactcaagtccaaggggcaggagcagcag
ctccattcgacggccgatttggtcaagaccatcctggatctcggaaaacaggggctcagc
atccagcggtacaaaggactgggcgaaatgaacccggagcagctctgggagacgacgatg
aacccggaagtgcgcacgctgctcaaggtcaagctggaagacatgaccggcgtggacgag
atctttaccattctcatgggcgacgaggtggagccgcgcaggaatttcattcaggcgcat
gcgctcgaagtgcggaatttagacgtgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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