KEGG   Candidatus Nitrosopumilus koreensis: NKOR_07565
Entry
NKOR_07565        CDS       T02304                                 
Name
(GenBank) transcription factor TFIIB cyclin-related protein
  KO
K03124  transcription initiation factor TFIIB
Organism
nkr  Candidatus Nitrosopumilus koreensis
Pathway
nkr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nkr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NKOR_07565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nkr03021]
    NKOR_07565
Transcription machinery [BR:nkr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     NKOR_07565
 Prokaryotic type
  Archaeal type
    TFB
     NKOR_07565
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon HTH_AsnC-type Cyclin_N HTH_11 HTH_3 HTH_Crp_2 HTH_24 zinc_ribbon_2 RB_B
Other DBs
NCBI-ProteinID: AFS81374
UniProt: K0B7B9
Position
complement(1259743..1260612)
AA seq 289 aa
MQTDNVTGEQFCGKCGYVVSEKSNESGPEWRAFQTDSGANPARTGAPSSLLIHDMGLSTV
INPINKDATGKPLSTSMKSTIERLRTWDSRSQAHEPQDRNLRQALGELTRIKDKIALSTN
VLEKAAYLYRKALEKKLVRGRSISAMIAASIYAACRDTETPRTLKDVADAANVKRKDIAR
CYRLLHHELELKMPVVNSIQCISRISSKLELSEKIKRHAIKVLQEAQNNKESAGKDPMGL
AATALYIACLKHGGSITQRDLAEAAGVTEVTIRNRYKGLKKQPNFKLES
NT seq 870 nt   +upstreamnt  +downstreamnt
atgcagactgataatgttactggagaacagttttgtggtaaatgtggatatgttgtttct
gaaaaatcaaatgagtcaggtccagaatggagggcatttcagacagatagtggggcaaat
cccgcaagaactggagcaccctcatcacttttgatacatgatatggggctatctactgta
attaatccaataaacaaggatgctactggcaagccactatcaacatctatgaaaagcacc
attgaacgattacggacttgggatagcagaagccaagctcatgaacctcaagatagaaat
ctcagacaagcactcggtgaattaactagaataaaagacaagattgcactttctacaaat
gttcttgaaaaagctgcatatttgtatagaaaagcattagagaaaaaactagttcgtgga
agatctatttctgcaatgattgctgcatcaatatatgcagcatgcagagatactgaaact
cctagaactctaaaagatgttgcagatgctgcaaatgttaaacgtaaagatattgctcga
tgttacagattattgcatcatgaattggaactcaagatgcctgttgtaaattcaattcaa
tgcatatcgagaatctcaagcaaattggaactatctgaaaaaatcaaacgacatgcaatc
aaagtacttcaagaagctcagaataacaaagaatctgctggaaaagaccctatggggctt
gctgcaactgcattatacattgcttgtttgaaacatggtggctctattactcaacgggat
cttgccgaggcggcaggagtaacagaagtgaccataagaaataggtacaaaggattaaaa
aaacagccaaatttcaagttagaatcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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