KEGG   Nitrosospira lacus: EBAPG3_001610
Entry
EBAPG3_001610     CDS       T04907                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
nlc  Nitrosospira lacus
Pathway
nlc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nlc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EBAPG3_001610 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nlc03400]
    EBAPG3_001610 (xth)
Enzymes [BR:nlc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     EBAPG3_001610 (xth)
DNA repair and recombination proteins [BR:nlc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     EBAPG3_001610 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: ARO86580
UniProt: A0A1W6SLA8
Position
371139..371930
AA seq 263 aa
MRIITLNLNGVRSAANKGFFRWLPMQQANIVCVQELKAHLIDITGEMASPDGYHGYFHCA
EKKGYSGVGIYSRHKPDNIIEGLGITEIDAEGRFLRADFGPLTVISIYFPSGSSGEHRQA
AKFFFLERFLPMLRELAGCGREIILCGDWNIAHKEIDLKNWRSNQKNSGFLPEERAWLSG
VFDELEFVDVFRQINVEPEQYTWWSNRGQAWAKNVGWRIDYQIATPEIAAKATEVSIYKA
ERFSDHSPLTIDYDYSILSESGN
NT seq 792 nt   +upstreamnt  +downstreamnt
gtgagaattataacgcttaacctgaatggcgtgcgctccgccgcaaacaagggattcttt
cggtggctgccaatgcagcaggcgaatatcgtatgtgtgcaggaactgaaagctcattta
atcgacattaccggagaaatggcttctcctgatggctaccatggttatttccactgcgcg
gaaaagaaaggatacagcggagtaggtatttacagccggcacaagcccgacaatattatt
gagggtcttggtattacggaaattgatgcggagggacgttttctacgcgcggactttggg
ccattgaccgtgatatcaatctactttccttccggctccagtggcgaacaccggcaagct
gccaaattcttctttcttgagcgatttctccccatgctcagagaactcgcgggttgtggc
agggagatcatattgtgcggtgactggaatatcgcccacaaagaaatcgacctgaagaac
tggcgctccaatcaaaaaaactccggctttctgcccgaagagcgtgcctggctgagcgga
gttttcgatgagcttgaatttgtcgatgtattccggcaaattaacgtggaacccgagcaa
tatacatggtggtccaatcgcgggcaagcctgggccaagaatgtgggctggcgcattgac
tatcagatcgccacaccggagatcgcggccaaggcgaccgaagtttcgatttacaaagcg
gagcgtttctcggatcattcaccgcttaccatcgactatgactatagcatattatccgaa
tccggtaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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