KEGG   Nitrosospira lacus: EBAPG3_005120
Entry
EBAPG3_005120     CDS       T04907                                 
Name
(GenBank) deoxyribonuclease HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
nlc  Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:nlc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nlc02048]
    EBAPG3_005120
Enzymes [BR:nlc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     EBAPG3_005120
Prokaryotic defense system [BR:nlc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   EBAPG3_005120
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII DEAD
Other DBs
NCBI-ProteinID: ARO87200
UniProt: A0A1W6SN18
Position
complement(1154768..1157962)
AA seq 1064 aa
MSTHAYSEEQLVEQPAISLFATLGWQTVSAQEETFGAGGTLGRETNGEVILVERLRAALC
KFNPALPLDAISNAVDDLTRDRSAMSPEAANREVYRLLKEGITISVPDREHGGQKTERLR
VVDWEHTENNNFLLVSQFSVVGSLYTCRPDLVGFVNGLPWVVIELKKPGVSARAAFDENL
THYKQQVPALFWSNALLIASNGTDSRVGSLTADWGRWVEWKRIEREDEVRRVSLEVMLRG
TCDRTHLLDLVENFSLFSEHKAGLVKILGQNHQFLGVNNAIASMLEARKLGHGRGGVFWQ
TQGSGKSFSMVFFAQKVLRKLAGNWTFVVVTDRVELDEQIAKTFKTTGAVSEAEGDECHA
ASGAHLRELLRGNHRYVFTLVHKFQTPELLCDRSDVIVLTDEAHRSQYDTLALNMRAALP
KAMFLAFTGTPLIAGEERTKEVFGDYVSIYDFQQSIEDGATVPLFYENRTPELQLVNPDL
NENIYRLIEDAELDAEQEAKLEKVLGRQYHLITRDDRLETVAQDIVRHFLGRGFLGKAMM
VSIDKATALRMHDKVKVHWAAETERVQKELGELHYRPPPGGSSMTPEQARRDLRMAELKA
RLEVLTSTDMAVIVSPGQNEIQQMQNLGLDIEPHRKRMNESQPGLDEKFKDTDDKLCLVF
VCAMWLTGFDAPSCSTVYLDKPMRNHTLMQTIARANRVFPGKHSGVIVDYANVFASLEKA
LAIYGTGKDGKSPVKDKQQLVEELRKSVADATAFCTAHGVMLAEIEATATGSIERLSHIE
DGMNALISPDPLRRDFFAHERLVSTLYRAAKPDSSALEFAGKVACLSALVDTIRAKLNPN
QPDISQVMGQINSLLDESITGHEIRQSGPPALNLSKINFEALAKRFEKSRHKNTDLEVLK
AAIRAQLGKMIQLNRTRADFAEKFETLIESYNAGSRSIEELFEELMRLSNSMNEEQERHV
RENMSEEELVIFDILTRPAPELSAEERAEVKKAARELLARLKALLVLNWRQKAAARSQLK
LTIEDTLDAGLPRAYTPELYSQKCSAVFEHVYESYPERNAGVYA
NT seq 3195 nt   +upstreamnt  +downstreamnt
atgagcacccacgcctacagcgaagagcaactcgtcgagcagcccgccatcagcctgttt
gccacgctcggctggcaaacggtgtcggcgcaggaagaaacctttggtgcgggtggcacg
ctggggcgcgagaccaacggcgaggtgatactggtggaacggctgcgcgccgctctttgc
aaattcaacccagcgctgccgctagatgcgatcagcaatgccgtcgatgatctgacccgc
gaccgttcggccatgagcccagaggccgccaaccgcgaggtctatcggctactgaaggaa
ggaattacgatatcagtgcccgaccgcgagcacggtggccagaagaccgaacgcctgcgc
gtggtggattgggaacacaccgagaataacaacttcctgctggtcagccagttcagcgtt
gtcggcagtctctatacctgccggcccgatctggtcggcttcgtcaatggcctgccttgg
gtggtgatcgaactcaagaaacccggcgtgtcggcacgcgccgccttcgacgaaaacctg
acccattacaagcagcaggttccggcgctgttctggagtaatgccctgctaatcgccagc
aacggcaccgacagccgcgtcggctcgctcaccgccgactggggccgttgggtggagtgg
aagcgcatcgagcgcgaggacgaagtgcgccgcgtgtcactggaagtgatgctgcgcggc
acctgcgaccgcacccacctgctcgatcttgtggagaacttctcgctgttttccgagcac
aaggccgggctggtcaagattctcggccagaaccaccagttcctcggcgtcaataatgcc
atcgcctcgatgctcgaagcgcgcaagctcggtcacgggcgcggcggcgtgttctggcag
acgcaggggagcggcaagagtttttctatggtcttcttcgcgcaaaaagtactgcgcaag
cttgccggcaactggacgtttgtggtcgtcaccgaccgcgtggaactggacgagcagatc
gccaagaccttcaagaccaccggtgcggtgtcggaggccgagggcgacgaatgccatgcc
gccagcggcgcccacctgcgggagttgctgcgcggcaatcaccgctacgtttttaccctg
gtacacaagttccagacgccggagctgctttgtgaccgttccgacgtgatcgtgctgacc
gacgaagcacaccgcagccagtacgacaccctggcgctcaacatgcgcgccgcgctgccc
aaggcgatgttcctcgcctttaccggcacaccgctgattgcaggcgaagagcgcaccaag
gaagtgttcggcgactatgtctcgatctacgacttccagcagtccatcgaagacggcgcc
accgtgccgctgttctacgagaaccgcacgccggagttgcagctcgtcaatcccgacctg
aacgaaaacatctaccgtctgatcgaggatgccgaactcgacgccgagcaggaagccaag
ctggagaaggtgctggggcggcaataccacctgattacccgcgatgaccggctggaaacg
gtggcgcaggacatcgtgcggcacttcctggggcgtggcttcctgggcaaggcgatgatg
gtttccatcgacaaggccacggcattgcgcatgcatgacaaggtgaaggtgcattgggcg
gcggaaaccgagcgggtacagaaggaactgggcgaattgcattaccggccccctccaggc
ggatccagcatgacgcctgagcaggcacggcgcgatctgcgtatggcggagctgaaggcc
cgcctggaagtgctgaccagtaccgacatggcggtgattgtctcgccggggcagaacgaa
atccagcagatgcagaacttgggtctcgatatcgagccgcaccgtaagcgcatgaacgaa
tcgcaaccggggctggacgagaagttcaaggacacggatgacaagctgtgcctagtcttt
gtctgcgccatgtggctgaccggcttcgacgcaccgagttgctcgacggtgtatctcgac
aagccaatgcgcaaccatacgctgatgcagaccatcgcccgcgccaaccgcgtcttcccc
ggcaagcacagcggcgtgatcgtcgattacgccaatgtcttcgcctcactggaaaaggcg
ctggcgatctacgggacaggaaaggacgggaaaagcccggtcaaggacaagcagcaactg
gtggaggaactgcgcaagtcggtggcggatgccacggccttctgcaccgcgcacggcgtg
atgctggccgagatcgaggctacggcgaccggcagcatagagcgtctgtcgcacatcgag
gacggcatgaacgcgctgatctcaccggacccgttgcgtcgcgacttctttgcccatgag
cggttggtgagcacgctctaccgggccgcgaagcccgattcttcagcgctggaatttgcg
ggcaaagtcgcctgcctctccgcgctcgttgacaccattcgcgccaagctgaacccgaac
cagccggatatttcccaggtgatggggcagatcaacagcctgctcgacgagtcgatcacc
ggccacgaaatccgccagtcaggaccgccagcgctcaacctgtcgaagatcaacttcgag
gcattggccaaacgcttcgagaaatctaggcacaagaacaccgacctcgaagtgctcaag
gcggcgatccgtgcccaactgggaaagatgatccagttgaaccgcacccgcgccgacttc
gccgagaagttcgagacgctgatcgaaagctacaacgccggcagccgcagcatcgaagaa
ctgttcgaggaactgatgaggctgtcaaacagcatgaacgaagaacaggaacggcatgtg
cgtgagaacatgagcgaggaggagttggtcatttttgacatcctcacgcggccggcgccg
gagttgtcggcggaggaacgggctgaggtaaagaaggctgcccgcgaattgctggcgcgg
ttaaaggcgctgctggtactgaattggcggcagaaggctgcggcgcgatcacagttgaag
ctaaccatcgaagacaccctcgacgctggattgccgcgtgcctacacgcctgaactttac
agtcagaaatgctcggcggtgttcgagcatgtgtatgagagctacccggagcgaaacgcg
ggggtgtatgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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