KEGG   Nomascus leucogenys (northern white-cheeked gibbon): 100579397
Entry
100579397         CDS       T03265                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain isoform X1
  KO
K06752  MHC class II antigen
Organism
nle  Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04145  Phagosome
nle04514  Cell adhesion molecules
nle04612  Antigen processing and presentation
nle04640  Hematopoietic cell lineage
nle04658  Th1 and Th2 cell differentiation
nle04659  Th17 cell differentiation
nle04672  Intestinal immune network for IgA production
nle04940  Type I diabetes mellitus
nle05140  Leishmaniasis
nle05145  Toxoplasmosis
nle05150  Staphylococcus aureus infection
nle05152  Tuberculosis
nle05164  Influenza A
nle05166  Human T-cell leukemia virus 1 infection
nle05168  Herpes simplex virus 1 infection
nle05169  Epstein-Barr virus infection
nle05310  Asthma
nle05320  Autoimmune thyroid disease
nle05321  Inflammatory bowel disease
nle05322  Systemic lupus erythematosus
nle05323  Rheumatoid arthritis
nle05330  Allograft rejection
nle05332  Graft-versus-host disease
nle05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:nle00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100579397
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100579397
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100579397
   04612 Antigen processing and presentation
    100579397
   04658 Th1 and Th2 cell differentiation
    100579397
   04659 Th17 cell differentiation
    100579397
   04672 Intestinal immune network for IgA production
    100579397
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100579397
   05164 Influenza A
    100579397
   05168 Herpes simplex virus 1 infection
    100579397
   05169 Epstein-Barr virus infection
    100579397
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100579397
   05152 Tuberculosis
    100579397
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100579397
   05140 Leishmaniasis
    100579397
  09163 Immune disease
   05310 Asthma
    100579397
   05322 Systemic lupus erythematosus
    100579397
   05323 Rheumatoid arthritis
    100579397
   05320 Autoimmune thyroid disease
    100579397
   05321 Inflammatory bowel disease
    100579397
   05330 Allograft rejection
    100579397
   05332 Graft-versus-host disease
    100579397
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100579397
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100579397
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nle04147]
    100579397
Exosome [BR:nle04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100579397
  Exosomal proteins of epithelial cells
   100579397
  Exosomal proteins of breast milk
   100579397
SSDB
Motif
Pfam: MHC_II_alpha C1-set
Other DBs
NCBI-GeneID: 100579397
NCBI-ProteinID: XP_003272212
Ensembl: ENSNLEG00000034417
Position
22a:complement(54086185..54107421)
AA seq 304 aa
MRSIPAVPGTVLEAHSFRVSSASTQPQFLFTVPVLTVINYRPYNMCPEDRMFHIRAMMLR
ALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHL
EEFGRAFSFEAQGGLANIAILNNNLNIMIQRSNHTQAASDPPEVTMFPKEPVELGQPNTL
ICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRV
EHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTILILKAIRSGRDPRA
QGPL
NT seq 915 nt   +upstreamnt  +downstreamnt
atgcgtagcattcctgccgtacctggtacagtgctagaggcccacagtttcagagtctca
tctgcctccactcagcctcagttcctcttcactgttcctgtgctcacagtcatcaattat
agaccctacaacatgtgccctgaagacagaatgttccatatcagagctatgatgttgaga
gccctctccttggctttcctgctgagtctccgaggagctggggccatcaaggcggaccat
gtgtcaacttatgccgcgtttgtacagacccatagaccaacaggggagtttatgtttgaa
tttgatgaagatgagcagttctatgtggatctggataagaaggagaccgtctggcatctg
gaggagtttggccgagccttttcctttgaggctcagggcgggctggctaacattgctata
ttgaacaacaacttgaatatcatgatccagcgttccaaccacactcaggccgccagtgat
ccccctgaggtgaccatgtttcccaaggagcctgtggagctgggccagccgaacaccctc
atctgccacattgacaagttcttcccaccagtgctcaatgttacgtggctgtgcaacggg
gagccagtcactgagggtgtcgctgagagcctcttcctgcccagaacagattacagcttc
cacaaattccattacctgacctttgtgccctcagcagaggacttctatgactgcagggtg
gagcactggggcttggaccaaccactcctcaagcactgggaggcccaagagccaatccag
atgcctgagacaacggagactgtgctctgtgccctgggcctggtgctcggcctagtgggc
atcatcgtgggcaccatcctcatcttaaaggctatacgttctggtcgtgacccccgggcc
caggggcccctgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (24)   
   KEGG PATHWAY (24)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (43)   

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