KEGG   Nomascus leucogenys (northern white-cheeked gibbon): 100603734
Entry
100603734         CDS       T03265                                 
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
nle  Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100603734 (LIG3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nle03400]
    100603734 (LIG3)
Enzymes [BR:nle01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100603734 (LIG3)
DNA repair and recombination proteins [BR:nle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100603734 (LIG3)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase Synaptonemal_3 mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 100603734
NCBI-ProteinID: XP_030663789
Ensembl: ENSNLEG00000001704
Position
Unknown
AA seq 1007 aa
MSLAFKILFPQTLCALSRKELCLFRKHHWPDVRQFSQWSETDLLHGHPLFLRRKPVLSFQ
GSHLRSRATCLVFLPGLHVGRCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGICRIG
KVVPNPFSEAGGDMKEWYHIKCMFEKLERARASTKKIEDLTELEGWEELEDNEKEQITQH
IADLSSKAAGTPKKKAIVQAKLTTTGQVTSPVKGTSFVTSTNPRKFSGFSAKPNNSAPLS
PTPKRSLSSSKCDPRHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFHGD
VYLTVKLLLPGVIKTIYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSK
SFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKM
NSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQ
PMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFK
DYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFND
VSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASDLADMITRVIREGLEGLVLKDV
KGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPGSQK
WCTVTKCAGGHDDATLTRLQKELDMVKISKDPSKIPSWLKVNKIYYPDFIVPDPKKAAVW
EITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFTVVA
GDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGELSNSNSKDGNMLTAKPSAM
KAGEKLAMKSSPVKVGEKRKAADETLCQTKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAF
NGDLVQEFDMTSATHVLGSRDKNSAAQQVSPEWIWACIRKRRLVAPC
NT seq 3024 nt   +upstreamnt  +downstreamnt
atgtctttggctttcaagatcctctttccacaaaccctctgtgcactcagccgaaaagaa
ctgtgcctattccgaaaacatcactggcctgatgtaagacaattcagccagtggtcagaa
acagatctgcttcatggacatcctctcttcctgagaagaaagcctgttctatcattccag
ggaagccatctaagatcacgtgccacctgccttgttttcttgccagggttgcatgtggga
cgctgcagtggcccctgtgagatggctgagcaacggttctgtgtggactatgccaagcgt
ggcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggcatatgccgaattggc
aaagtggtgcccaatcccttctcagaggctgggggtgatatgaaagagtggtaccacatt
aaatgcatgttcgagaaactagagcgggcccgggcctccacaaaaaaaatcgaggacctc
acagagctggaaggctgggaagagctggaagataatgagaaggaacagataacccagcac
attgcagatctgtcttctaaggcagcaggtacaccaaagaagaaagctattgtccaggct
aagttgacaaccactggccaggtgacttctccagtgaaaggcacctcatttgtcaccagt
accaatccccggaaattttctggcttttcagccaagcccaacaactctgcccccttgagc
cccacccctaagagaagtctgtcttcaagcaaatgtgaccccaggcataaggactgtctg
ctacgggagtttcgaaagttatgcgccatggtggccgataatcctagctacaacacgaag
acccagatcatccaggacttcctgcggaaaggctcagcaggagatggtttccacggtgat
gtgtacctaacagtgaagctgctgctgccaggagtcattaagactatttacaacttgaat
gataagcagattgtgaagcttttcagtcgcatttttaactgcaacccagatgatatggca
cgggacctagagcagggtgacgtgtcagagacaatcagagtcttctttgagcagagcaag
tctttccccccagctgccaagagcctccttaccatccaggaagtggatgagttccttctg
cggctgtccaagctcaccaaggaggatgagcagcaacaggccctacaggacattgcctcc
aggtgtacagccaatgaccttaaatgcatcatcaggttgatcaaacatgatctgaagatg
aactcaggtgcaaaacatgtgttagacgcccttgaccccaatgcctatgaagccttcaaa
gcctcgcgcaacctgcaggatgtggtggagcgagtccttcacaatgcacaggaggtggag
aaggagccgggccagagacgagctctgagcgtccaggcctcactgatgacacctgtgcag
cccatgctggcggaggcctgcaagtccattgagtatgcgatgaagaaatgtcccaatggc
atgttctctgagatcaagtacgatggagagcgagtccaggtgcataagaatggagaccac
ttcagctacttcagccgcagtcttaagcccgtcctgcctcacaaggtggcccactttaag
gactacattccccaggcttttcctgggggccacagcatgatcttggattctgaagtgctt
ctgattgacaacaagacaggcaaaccactgccctttgggactctgggagtgcacaagaaa
gcagccttccaggatgctaatgtctgcctgtttgtttttgattgtatctactttaatgat
gtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcatgacaacatggtt
gaaattccaaaccggataatgttctcagaaatgaagcgagtcacaaaagcttcggacttg
gctgacatgataacccgggtgatccgggagggattggaggggctggtgctgaaggatgtg
aagggtacatatgagcctgggaagcgacactggctgaaagtgaagaaagactatttgaac
gagggggccatggccgacacagctgacctggtggtccttggggccttctatgggcaaggg
agcaaaggcggcatgatgtcaatcttcctcatgggctgctacgaccctggcagccagaag
tggtgcacagtcaccaagtgtgcaggaggccatgatgatgccacgcttacccgcctgcag
aaggaactagacatggtgaagatcagcaaggaccccagcaaaatacccagctggctgaag
gtcaacaagatctactatcctgacttcatcgtcccagacccaaagaaagctgccgtgtgg
gagatcacaggggctgaattctccaaatcggaggctcacacagctgacgggatctccatc
cgattccctcgctgcacccgaatccgagatgataaggactggaaatctgccactaacctt
ccccaactcaaggaattgtaccagttgtccaaggagaaggcagacttcactgtagtggct
ggagatgaggggagctccactacagggggtagcagtgaagagaataaggggccctcaggg
tctgctgtgtcccgcaaggcccccagcaagccctcagccagtaccaagaaagcagaaggg
gagctgagtaactccaacagcaaagacggcaacatgctgactgcaaagccttctgctatg
aaggcgggagagaagctggccatgaagtcttctccagtgaaagtaggggagaagcggaaa
gctgctgatgagaccctgtgccaaacaaaggtactgctggacatcttcactggggtgcgg
ctttacttgccaccctccacaccagacttcagccgtctcagacgctactttgtggcattc
aacggggacctggtacaggaatttgatatgacctcagccacgcacgtgctgggtagcagg
gacaagaactctgccgcccagcaggtctccccagagtggatttgggcatgtatccggaaa
cggagactcgtagctccctgctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (9)   
   Pfam (9)   
All databases (42)   

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