KEGG   Numida meleagris (helmeted guineafowl): 110387115
Entry
110387115         CDS       T06015                                 
Symbol
SNRNP200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
nmel  Numida meleagris (helmeted guineafowl)
Pathway
nmel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110387115 (SNRNP200)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nmel03041]
    110387115 (SNRNP200)
Enzymes [BR:nmel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110387115 (SNRNP200)
Spliceosome [BR:nmel03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    110387115 (SNRNP200)
 Complex C
   U5 SnRNP specific factors
    110387115 (SNRNP200)
SSDB
Motif
Pfam: Sec63 DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_22 AAA_30 PhoH SWI2_SNF2 Sigma54_activ_2 DUF603 Hikeshi-like_C
Other DBs
NCBI-GeneID: 110387115
NCBI-ProteinID: XP_021230602
Position
21:3253316..3273162
AA seq 2136 aa
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDIYGEVRDEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFAQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLVSVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALESDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGINVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLVILDEIHLLHDDRGPVLESLVARAIRNIEMTQEDVRLVGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAETVLGNVQNAKDAVNWLGYTYLYIRMLRSPTLYGISHDDLKGDPLLEQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNETMQTYNQLLKPTLSEIELFRVFSL
SSEFRNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFKKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTIAPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLVTFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYIT
PMEALAEQVFMDWYEKFQERLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNVNLFIVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAIMKHSPKKPII
VFVPSRKQTRLTAINILTTCASDVQRHRFLHCAEKDLVPYLDKLNDNTLKETLVNGVGYL
HEGLTAMERRVVEQLFSSGAVQVMVASRSLCWGMNIAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGVSHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLTNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEDRNALLQLSDAQIADVARFCNRYPNIELSYEVVEKESIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDSKSNSLISIKRLTLQQKAKVKLDFVAPATG
THNYTLYFMSDAYMGCDQEYKFSVDVKEAESDSESD
NT seq 6411 nt   +upstreamnt  +downstreamnt
atggcggacgtgaccgctcgcagcctgcagtatgagtacaaggcgaactccaacctcgtg
ctccaagctgaccgctctctcattgaccggacgcggcgtgatgagccgacgggcgaggtg
ctgtccctggtgggcaagctggagggcacccgcatgggcgacaaggcgcagcgcaccaag
ccgcagatgcaggaggagcgacgcgccaagagaaggaagcgcgatgaggacaggcacgac
atcaacaaaatgaagggctacaccctgctgtccgagggcatcgacgagatggtggggatc
atctacaagcccaagaccaaggagacccgggagacctacgaggtgctgctgagcttcatc
caggcagcccttggggaccagccgcgagacattctgtgcggggctgccgacgaggtcctg
gcagtgctgaagaacgagaagctgcgcgacaaggagaggcgcaaggagatcgatctgctg
ctgggccagaccgacgacacccgctaccacgtgctggtgaacctgggcaagaagatcacg
gattacggcggcgacaaggaaattcagaacatggatgacaacatcgatgagacgtacggc
gtgaacgtgcagttcgagtctgacgaggaggaaggtgacgaggacatctacggcgaagtg
cgtgacgaggcgtccgatgatgacatggaaggagacgaagccgtcgtccgttgcaccctc
tcagccaaccttgtagcatcaggtgaattgatgagctcaaagaagaaggatctgcatccc
cgagacatcgacgccttctggctccagcggcagctgagccgcttctacgatgatgccatc
gtttcccagaagaaggcagatgaagtgctggagatcctcaagactgcgagcgatgaccgg
gagtgtgagaaccagcttgttctgctcctgggcttcaacacctttgacttcatcaaagtg
ctgcggcagcaccgcatgatgatcctctactgcactttgctggccagtgcccaaagcgaa
gctgaaaaagaaaggataatggggaagatggaagcagatcctgagctgtccaagttcttg
taccagttgcatgagaccgagaaggaggatctcatccgggaggagcgctctcgccgggag
cgtgttcggcagtcccggatggacactgacctggagaccatggatctcgaccaaggagga
gaggcgctggctccccggcaggtgctggacttggaggacctggtgtttgctcagggcagc
cacttcatggccaacaagcgatgccagctgcccgacggctccttccgcaggcagcgcaag
ggctacgaggaggtgcacgtgccggccctgaagccgaagccttttggctctgaagagcaa
ttggtttctgtggaaaagctgcccaaatatgcccaggctggatttgaagggtttaaaaca
ctgaaccgtatccagagcaaactgtaccgcgctgcgctggagtcagatgagaacctgctg
ctgtgcgctcccacgggagctgggaagacgaacgtggcgctgatgtgcatgctgcgagaa
atagggaagcacatcaacatggatgggaccatcaacgtggacgacttcaagatcatctac
atcgcacccatgaggtctttggtgcaggagatggtgggcagcttcgggaagcgcctggca
acctacggcatcaacgtggcggagctgacgggggatcaccagctgtgcaaggaggaaatc
agcgccacccagatcatcgtctgcaccccggagaagtgggacatcatcactcgcaagggg
ggagagcgcacctacacccagctggtgcggctcgtcatcctggatgaaatacacctgctg
catgacgaccgagggcctgtgctggagtctttggtcgccagagccatccgcaacatcgag
atgacgcaggaggacgtcaggctcgtcggcttgagtgccaccctccccaactacgaggac
gtggcgacgttcctccgggtggaccctgccaaaggcttgttctattttgataacagcttc
cgaccagtgcccctggagcagacctacgtgggtatcacagagaagaaagccatcaaacgc
ttccagataatgaatgagatcgtttatgagaagattatggagcacgcaggaaagaaccag
gtgctggtgttcgttcactccaggaaggagactggcaagacagcacgggccatcagggac
atgtgtctggagaaggacaccctgggcctcttcctgcgagagggctcggcctccaccgag
gtgctgaggacggaagccgagcagtgcaagaacctggagctgaaggacctgctgccctat
ggctttgccattcaccacgctgggatgacacgagtggacaggacgttggtggaggatctg
tttgctgacaaacacatccaggttctggtgtccacagcaacgctggcctggggggtgaac
ctccctgcccacaccgtcatcatcaagggcacgcaggtgtacagccctgagaagggacgc
tggacggagctcggtgctttggacatcctgcagatgctgggccgtgctgggaggcctcag
tacgacaccaaaggagaggggatcctcatcacatcccacggcgagctgcagtattacctg
tccctgctcaaccagcagctccccatcgagagtcagatggtgtcgaagctcccggacatg
ctgaatgcagaaaccgtgctgggaaacgtccagaacgcgaaggacgcggtgaattggctc
ggttacacctacctgtacatccggatgctgcgctcccccaccctctatgggatttcccac
gatgatttgaagggggacccgctgctggagcagcgccgcttggatctggttcacaccgca
gccctcatgttggacaagaacaacctggtgaagtacgacaagaagacggggaacttccag
gtgacggagctgggccgcatcgccagccactactacatcaccaacgagacgatgcagacg
tacaaccagctcctgaagcccaccctgagtgaaatcgagctgtttcgggtcttctcgctg
tcctcggagttcagaaacatcacagtgagggaggaggagaagcttgagcttcagaagttg
ctggagcgagttccgatccctgtgaaggagagcatagaggagcccagtgccaagatcaac
gtgctcctccaggccttcatctcccagctgaagctggaaggatttgctctcatggcagac
atggtgtacgttacccagtccgcggggcggctgatgcgcgccatcttcgagatcgtcctg
aaccgcggctgggcccagctcaccgacaagaccctcaacctctgcaagatgattgacaaa
cggatgtggcagtccatgtgccctctgcgccagttcaagaagctgcctgaagaagtggtg
aagaaaatcgagaagaagaatttcccgtttgaacggctctacgacctgaaccacaacgaa
ataggagagctgatccggatgcccaagatgggcaaaacaatccacaaatacgtccatctg
ttcccaaagctggagctctctgtccacctgcagcccattacccgctctaccctgaaagtg
gagctcaccattgcccccgacttccagtgggatgagaaggtgcacggctcatccgaagct
ttctggatcctggtggaggacgtggacagcgaggtgatcctgcaccacgagtacttcctg
ctgaaggccaagtacgcgcaggacgagcacctcgtcaccttcttcgtgcccgtgttcgag
ccgctgcccccgcagtacttcatccgggtggtgtccgaccgctggctctcctgtgagacc
cagctgcccgtttccttccgccacctgatcctccctgagaagtacccccctcccacggag
ctgctggatctgcagccgctgcccgtgtccgctctgcggaacagcgccttcgagagcctc
taccaggacaagttccctttcttcaaccccatccagactcaggtgtttaacaccgtctac
aacagcgacgacaacgtgtttgtgggtgcccccacgggaagcgggaagaccatttgtgct
gagtttgccatcctgaggatgctgctgcagaactcggagggacgctgcgtgtacatcacc
cccatggaggccctggcagagcaggtcttcatggactggtacgaaaagttccaggagcgt
ctcaataagaaagtggtcttgctgacaggagagaccagcactgacctgaagctgctgggc
aaagggaacatcatcatcagcacccctgagaaatgggacatcctgtcccggcgctggaag
cagcgcaagaacgtccagaacgtcaacctcttcatcgtggatgaagtgcacctcatcggg
ggcgagaacgggcccgtgctggaggtcatctgctcccggatgcgctacatctcctcgcag
atcgagcggcccatccgcatcgtggccctcagctcgtccctgtccaacgccaaggacgtg
gcacactggctgggctgcagtgccacctccaccttcaacttccaccccaacgtccgcccc
gtgcccctagagctgcacatccagggcttcaacatcagccacacgcagacccgcctgctc
tccatggccaagcccgtctaccacgccatcatgaagcactcccccaaaaagcccatcatc
gtcttcgtgccgtcccgcaagcagacgcggctcacggccatcaacatcctcaccacgtgc
gcctcagacgtccagagacacaggttcctgcactgcgcagagaaggacctggtgccctac
ctggacaagctgaatgacaacaccctgaaggagacgctggtgaacggggtgggctacctg
cacgaggggctgacggccatggagcggcgcgtggtagagcagcttttcagctctggagca
gtgcaggtgatggttgcctcccgcagcctctgctggggtatgaacattgcagcgcacctg
gtgatcatcatggacacgcagtactacaacggcaagatccacgcgtacgtggattacccc
atctacgacgtgctgcagatggtgggccacgccaaccgcccgctgcaggacgacgaaggt
cgttgtgtcatcatgtgccagggatccaagaaggatttcttcaagaaattcctctacgag
cccctgcccgtggaatcacacctggaccattgcatgcacgatcacttcaacgccgagatt
gtcaccaagaccattgaaaacaagcaggatgcggtggactacctcacttggacgttcctg
taccgcaggatgacgcagaatccaaactactacaacctgcaaggtgtgtcccacaggcat
ctgtccgaccacctctcggaactggtggagcagaccctcagtgacctggagcagtccaag
tgcatcagcatcgaggacgagatggacgtggctcccctgaacctggggatgatcgcagcc
tattactacatcaactacaccaccatcgagctcttcagcatgtccctcaatgccaaaacc
aaagtgcgagggctgattgagatcatctccaacgctgctgagtatgagaacatccctatc
cggcaccacgaggacaacctgctgcgccagctggcccagaaagttccccacaagctgacc
aaccccaaattcaacgacccccacgtcaagaccaacctcctgctgcaggctcacttgtcg
cgcatgcagctgagcgccgagctgcagtcggacacggaggagatcctcagcaaggcgatc
cggctgatccaggcgtgcgtggacgtcctgtccagcaatggctggctgagccccgcgctg
gccgccatggagctggcgcagatggtgacacaagccatgtggtccaaggattcctacctc
aagcagctgcctcacttcacctctgagcacatcaagcgctgcaccgacaagggggtggag
agcgtctttgacatcatggaaatggaggacgaggaccggaacgccctgctgcagctctcg
gacgcgcagatcgccgacgtcgcccgcttctgcaaccgctaccccaacattgagctgtcc
tacgaggtggtggagaaggaaagcatccggagtggggggcccgtggtggtgctggtgcag
ctggagcgtgaggaggaggtcaccggccccgtcatcgctcccctcttcccccagaaacgt
gaggagggctggtgggtggtgatcggcgactccaagtccaacagcctcatctccatcaag
cggctgacgctgcagcagaaggccaaggtgaagctggatttcgtggccccggccacgggg
acgcacaactacacgctgtacttcatgagcgacgcctacatgggctgcgaccaggagtac
aagttcagcgtggacgtgaaggaggccgagagcgacagcgaatccgattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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