KEGG   Numida meleagris (helmeted guineafowl): 110388624Help
Entry
110388624         CDS       T06015                                 

Gene name
DHX8
Definition
(RefSeq) ATP-dependent RNA helicase DHX8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
nmel  Numida meleagris (helmeted guineafowl)
Pathway
nmel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110388624 (DHX8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nmel03041]
    110388624 (DHX8)
Enzymes [BR:nmel01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     110388624 (DHX8)
Spliceosome [BR:nmel03041]
 Complex C
  Other components
   Step II factors
    110388624 (DHX8)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: OB_NTP_bind HA2 S1 Helicase_C DEAD AAA_22 T2SSE AAA_19 PRP38_assoc Flavi_DEAD AAA_30 AAA_16 Transformer PhoH Sigma54_activ_2 ABC_tran Spem1 Presenilin
Motif
Other DBs
NCBI-GeneID: 110388624
NCBI-ProteinID: XP_021233753
Position
26
AA seq 1192 aa AA seqDB search
MADLAALEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNSTFDTFKAVLLK
NGAEFTDSLISNLLRLIQTMRPPSKPSTSKEAIAKPKSEKERLKELFPALCRPDNPNIRN
MLDEDDVKVAADALKELEALMPSADRQGKQRNSDHRAKKKRRSRSRSRDRKRRHRSRSRS
RSRTRDRNRGKSRYRSRSRSRSPSRDRRDRDKYVEKSNERWRDKHVDRPPPEEPSIGDIY
NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG
SKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTLER
KRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPF
LRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTH
WVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIF
RLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAK
RVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH
ERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY
TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK
TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAST
VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM
LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV
YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAIC
SGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTI
DPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq 3579 nt NT seq  +upstreamnt  +downstreamnt
atggcggacctggcggcgctggaggagctcgccaagctcgagtacttgtcgctggtctcc
aaggtctgcaccgagctcgacaaccacctgggcatcaacgacaaggacctggccgaattt
gtgatcagcctcgctgagaaaaactcgacatttgacacgtttaaagctgtccttctaaag
aatggggctgagttcactgattcccttattagtaacttgctacgtctcatacagacaatg
cggcctccatcaaaaccatctacgagtaaagaggccattgccaaacccaaatcggaaaag
gaaaggttgaaggaattgtttccagccctttgcaggccagacaatcccaacattaggaac
atgctggatgaagatgatgtgaaagtggcagctgatgcactgaaagaacttgaagctctg
atgcctagtgcagacaggcaaggcaaacaaaggaacagtgaccaccgggcaaagaaaaag
aggaggagccgaagccgtagcagggacaggaaacgaaggcacagatctcgctctaggtct
cgttctaggactcgggataggaacaggggtaaatccagataccgctcacggagcaggagc
cggagtccaagtagggaccgtagggatcgagacaagtatgtcgagaagagcaatgagaga
tggagagacaagcatgtagaccgtccaccgcctgaggagccttccattggagacatttac
aatgggaaagtcaccagtataatgcaatttgggtgctttgtgcagctggaagggctaagg
aagcgttgggagggcttggtccacatctcagagcttcgaagagaaggacgtgttgccaac
gttgctgatgttgtgagcaaaggacaaagagtaaaggtcaaagtgttatcctttactgga
tccaaaactagcctgagcatgaaggatgttgatcaagacactggggaagacttgaatcca
aaccggaggagaaacttggttggagaaaccaatgaagaaacttctatgagaaacccagat
agacccagtcacctgtccttggtgaatgccccggaggtggaggatgataccctggaacgg
aaacgcctgacccgaatttcagacccagagaaatgggaaataaagcagatgattgcagct
aatgtgctttccaaggaagagtttcctgactttgatgaggagactgggattcttcctaaa
gttgacgatgaagaagatgaagatctcgagattgagttagttgaagaggaaccaccattc
cttcgaggtcatactaaacagagtatggatatgagtcctatcaaaatagtaaagaatcca
gatggttcattgtcccaggctgcaatgatgcagagtgctttagctaaagaaagaagagaa
cttaaacaagcccaaagagaagcagagatggattctatccccatgggactcaacacgcat
tgggtggatcctctccctgatgtggatggaagacaaatagctgcaaatatgcgaggtatt
gggatgatgcccaatgatatcccagagtggaagaaacatgcatttggtggcaacaaagcc
tcttatggtaagaagacacagctttctatcattgagcagagagagagtctcccaatcttc
cgactgaaggagcagctgatacaagctgtgcatgacaaccagattctgattgttattgga
gagacaggatctgggaaaacaacgcagattacccaatacctggctgaggcagggtacaca
tcgagaggaaagattggatgtactcagcctcgcagagtggctgcaatgtctgttgcgaag
agagtatcagaagaatttggttgctgtctgggacaagaggttggctacaccattcgattt
gaagactgcactagccctgaaactgtcatcaagtacatgacggatggtatgttgctgaga
gaatgcttgatagatcctgatctgacccagtatgccatcattatgctggatgaagcccac
gagaggacgattcatacagatgtgctctttgggctcctaaagaagacagtgcagaagcgg
caggatatgaagctgatagtgacatcagcaacactggatgctgtgaagttctctcagtat
ttctacgaggctccaatcttcacaattcctggcagaacgtacccagtcgaaattctgtac
accaaagagccagagacagattatttggatgctagtctgattacagtaatgcagatccac
ttaactgaaccaccaggcgacattttggtgtttctaactggtcaggaggagattgacaca
gcctgtgagatcctttatgaaaggatgaaatctctgggacctgacgttccagagctgatt
atcctgccagtatattcagccttacccagtgaaatgcaaaccaggatctttgacccagcc
ccaccaggaagcagaaaggtggttattgccactaacattgctgagacatcgcttactatt
gatggaatatattatgtagttgatcctggctttgtgaaacagaaggtatacaactccaag
actgggattgaccagctggtcgttacaccaatttcacaggctcaagcaaagcagcgagca
ggaagagctggcagaacaggacctgggaagtgctacaggctgtacacagagcgtgcttat
cgagatgagatgctaaccaccaacgtgcctgaaatccagagaacaaatttagccagtaca
gtactctccctgaaggctatgggcatcaatgatttgctatccttcgactttatggatgct
cccccaatggaaactctcatcactgccatggagcagctgtacactctgggagctctggat
gatgagggactactcactcgacttgggcgcaggatggcagaattccccttggagcccatg
ttgtgtaagatgctgatcatgtcggtacatctgggatgcagcgaggaaatgctgacaata
gtctccatgctgtctgttcagaacgtgttctacaggccaaaggataaacaagcactcgcc
gatcaaaagaaagccaagttccatcagacagaaggtgaccacctcactctgctggctgtg
tacaattcctggaagaacaataaattttcaaatccttggtgctatgaaaatttcatccaa
gcccgctccttacgcagggcacaggacatccgcaagcagatgctgggcattatggacagg
cacaagctggatgtggtgtcctgtggcaaggcaacagttcgagtgcagaaggctatttgc
agtggcttcttccgaaatgcagctaagaaggatccccaggagggttatcgaacactcatt
gatcagcaagtagtctacattcatccatccagtgctctcttcaacaggcagccagaatgg
gtggtgtatcacgagctggtgctgaccaccaaggagtacatgcgtgaagtgacgaccatc
gatccccgctggctggtggaattcgccccggctttcttcaaggtttcagacccaaccaaa
ctgagcaaacagaaaaagcagcagcgccttgaacctctgtacaaccgctacgaggagccc
aacgcctggagaatatcgcgtgcgttcagacggcgataa

DBGET integrated database retrieval system