KEGG   Numida meleagris (helmeted guineafowl): 110403266
Entry
110403266         CDS       T06015                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
nmel  Numida meleagris (helmeted guineafowl)
Pathway
nmel04510  Focal adhesion
nmel04512  ECM-receptor interaction
nmel04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110403266 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110403266 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110403266 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nmel04147]
    110403266 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:nmel00536]
    110403266 (COL4A5)
Exosome [BR:nmel04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   110403266 (COL4A5)
Glycosaminoglycan binding proteins [BR:nmel00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   110403266 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 110403266
NCBI-ProteinID: XP_021262011
Position
8:complement(14048002..14129192)
AA seq 1721 aa
MKATFSFSSLSQVFFHNIGYCYFEFHNCLCLFLVMKARSLKAGRNGCWPSEFHGYVLACH
GCTSLTKCDCSGVKGEKGERGFPGLEGQPGLPGFPGPEGPPGPRGAKGDDGLPGPIGPKG
IRGPPGLPGFPGTPGLPGLPGQDGPPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPG
LPGMKGEAGEIITSLLPGQKGDQGFPGLPGIPGPPGSIGIPGPVGPPGPPGLTGPPGPPG
LPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPG
LPGPQGPPGLPGGVKGEKGEQGEPGKRGKPGKDGEPGQPGRDGLPGGPGVNGVPGRDGEK
GEKGDTGPPGPPGSVISRPGIDATVGPKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGI
TTVGPPGPPGLPGERGQKGDPGLPGVSIPGQPGLDGPRGPPGPPGPPGPPAPSVPPSEGL
CERGPPGPPGIPGQQGFAGERGQKGDQGDTCFNCIGTGISGPPGERGPPGPPGTPGSPGF
PGPKGEKGLPGLTGLVGPPGFPGPPGAPGRPGPKGDPGDVLASPRMKGDKGDPGFPGPPG
LPGIDGTPGRDGLPGPPGPKGEPGSVAFKGEMGIPGDPGIPGLPGDKGLPGPPGFGPQGL
PGEKGIQGVSGRPGPPGVPGPKGDPGQTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRG
LSGIPGAKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRPGLDGPPGPPGFPGQKGD
RGFGVPGPPGPPGPPGVKGVQGPKGDPGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLP
GPPGIPGIGGQGPPGPPGPPGPVGPPGLQGVPGEKGDPGPPGVDVPGPPGDQGSPGYPGP
PGLPGPQGSPGPPGRDGIPGFPGAKGEMGIMGAPGPPGPPGTPGRSGLPGLKGNSGLPGP
PGPPGPLGQKGVKGEAGLPGPPGRVDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDP
GPPGLSGPPGAPGLPGIKGDMGLPGQPGPTGPPGLKGAMGEMGLPGPPGSKGSQGIAGRP
GQPGPAGFPGLKGEKGDPGLSSIGIPGLPGPKGDLGLPGYPGSPGSKGIAGNPGLPGLPG
SPGAKGEPGLPGFPGTPGIPGPKGIEGPPGNPGLPGPPGPVGDTGRPGPPGPPGEKGQPG
RDGIPGPAGQKGEPGLPGFGRPGPPGLPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGF
PGLQGPPGPPGLPGPPLEGPKGSPGPPGVPGRPGPSGPPGSPGPEGPRGPPGSGGLKGEK
GNPGQPGQPGLTGQKGDQGPPGRQGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPA
GLTGSQGLPGPPGPPGLPGTIGRSIVVKGDPGPPGPPGLPGSKGPPGLAGPQGLPGPVGV
PGDPGRDGLPGFDGPAGRKGERGLPGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLI
TRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNIN
NVCNFASRNDYSYWLSTPEPMPMSMEPLTGQNIQPFISRCVVCEAPAMVIAVHSQTIQIP
SCPPGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANS
YSFWLATVEVSEMFSKPQSETLKAGDLRTRISRCQVCMKKT
NT seq 5166 nt   +upstreamnt  +downstreamnt
atgaaggccacctttagtttctcttctttgtctcaagtattttttcacaatattggttac
tgctattttgagtttcataactgcttgtgcctctttctagttatgaaagctaggtctcta
aaagcaggaagaaatggatgctggccttcagaattccatggatatgtcttggcttgccat
ggatgtacatctctaaccaaatgtgattgcagtggagttaaaggcgaaaagggtgaaagg
ggattcccaggcttggaaggacagccaggtttgcctgggtttccaggaccagaaggacct
cctggtccaagaggtgcaaagggtgatgatggacttccaggacctattggccccaaagga
atcagaggtccaccagggcttccaggatttccaggaacaccggggcttcctggtttacca
ggacaagatgggccgccaggacctcagggtatcccaggctgcaatggaacgaagggagaa
cgtggattcccaggcagtccaggttttccgggtttacaagggcctcctgggccccctggt
ctgccaggtatgaagggcgaagcaggagaaataattacatccttgctgccaggacagaag
ggtgaccaaggatttccaggtcttccaggaatacctggtccacctggttccataggaata
ccaggcccagttggtcctccagggcccccaggtttgacaggacctcctggtccaccagga
ctgccaggacctaagggtaatatgggcttgaatttccaaggacctaaaggtgaaaaaggt
gaacaaggtcttcaaggacctccagggccaccaggacagattggagaacagaagagacca
aatgacattgagtttcagaaaggagatcagggtattccaggtgatccaggcccaccagga
cttcctgggccacaaggccctcctggtcttcccggtggcgtaaaaggtgaaaaaggtgag
caaggagaaccaggcaaaagaggaaagccgggcaaagatggagaacctggtcagcctggt
agggatggcttacctggtgggcctggagtaaatggtgttccaggaagagatggtgaaaag
ggtgaaaaaggtgacactggtcctcctggtcctcctggaagtgtcatttcaagaccaggc
attgatgcaacagtgggaccaaaaggtagcaaaggattgccaggactgccaggagccaaa
ggggagcgtggattctctggtaggccaggcccccctggcttgccaggttctccagggatc
actactgttggacctcctggcccacctggcttacctggtgagagaggacagaagggagat
ccaggtttacctggtgtttccattcctggacaaccaggacttgatggaccacggggacct
ccaggacctccaggtcctccaggaccacctgcaccatctgttcctcctagtgaagggtta
tgtgagcggggtccaccaggtcctccaggaattccaggacaacaaggctttgcaggagag
agaggccaaaaaggtgatcaaggagacacatgcttcaattgtataggaactggaatatct
gggcctcctggtgagagaggaccaccgggacctccaggtactccaggttctcctggtttt
cctgggccaaaaggtgaaaaaggacttccgggattaacaggccttgtagggccaccagga
ttcccagggccaccaggtgctcctgggagacctggtcctaaaggagaccccggggatgtc
ttggcttctccaagaatgaaaggtgacaaaggagaccctggcttccctggacccccaggc
cttcctggcatagatggcactcccggacgagatggactgccaggtccgcctggccctaaa
ggggaacctggcagtgttgcattcaaaggagaaatgggaattccaggtgacccaggaata
ccaggtcttcctggagacaaaggacttcctggacctcctggttttggtccacaaggttta
cctggtgaaaagggcatccaaggtgtatcaggtcgtccaggacctcctggagttcctggt
ccgaaaggtgaccctggtcagactattacagaaccaggagttcctggcccccctggtcct
ccaggaagaaatggtgacccaggtcttccaggggatcctggtcagccaggtcagcgtggc
ttatcaggcatcccaggtgcaaagggagagccaggaattcctggcattggacttccaggt
ccaccaggcccaaaaggtttcccagggattccaggcccacccggagctccaggaactcca
ggtcgccctggcctagatggacctcctggaccacctggtttcccaggtcagaagggagat
cgtggatttggagttccaggaccacctggacccccaggaccaccaggcgtaaaaggagtt
caaggacctaaaggtgatcctggcttcccaggaaaccctggtcttccaggacgggcgggt
tttgatggaactccaggacccaaaggtgaccctggaccaagcggaccaccaggacttcca
ggcccaccgggcatccctggcattggaggccaagggccacctggacctccaggaccacca
ggtcctgttggcccaccagggttgcagggcgtaccaggggagaaaggggatccaggtcct
ccaggcgtcgatgttcctggccctccaggtgaccaaggatccccaggatatccaggaccc
cctggcctcccaggccctcagggttcacctggaccacctggtcgggatggaatacctgga
tttccaggtgccaaaggtgagatgggcatcatgggagcccctgggcctccagggcctcca
ggaactcctggaagaagtggccttcctggcttgaaaggtaacagtggattgcctggcccc
ccagggcctcctggaccattaggtcagaaaggtgtcaaaggtgaagcaggcctgccaggt
ccacctggaagagttgatccaaaacagctaggagcaaaaggagaaaaaggcgagccgggt
gttccaggtattcctggtttatcagggcagaaaggttatcaaggtctcccaggtgacccc
ggtccaccaggacttagtggtccaccaggcgcaccaggtttgccaggcatcaagggagac
atggggcttcctgggcagccaggaccaacaggacccccggggctaaaaggtgccatgggt
gagatgggccttccaggtcccccaggaagtaaaggcagccaaggaatagcaggacgtcca
gggcagcctgggcctgctggatttcctggactgaaaggggagaagggtgaccctggcctt
tcaagcatcggtattcctggtctgcctggaccaaagggtgatcttggtttgcctggatac
ccgggtagtccaggcagtaaaggtatagctggaaatcctggtttgcctggattaccaggc
agtccaggtgcaaaaggagagccaggccttcctggattcccaggaacaccgggaattcca
ggaccaaaaggtatcgaagggcctccaggtaatcctggtctgcctgggccccctgggcca
gtaggtgatactggtcgtcctggccctcctggtcctccaggggagaagggacagcctggt
cgagatggtatccctggaccagctggtcagaagggcgaaccaggtctgccgggttttggg
cgcccaggacctccagggctcccaggattatcagggcaaaaaggtgaactggggttacct
ggcccaccaggaccccctggacttccaggcctgaagggagaaccaggtttccagggattc
cctggtctacagggtccaccaggtcctccaggattaccagggccgcctctggaaggtcct
aaaggtagccctggcccaccaggtgttccaggaagaccaggtccctcaggtcctccaggt
tcaccaggccctgaaggtccacgagggccaccaggcagtgggggacttaaaggggaaaaa
gggaatccaggacagcctggccaacctggcctgactggtcaaaagggagaccaaggacca
cctggacgccagggagatcccggtcgtcctggtctgaatggaatgaagggtgaccccggg
gttccaggtgttccaggattcccaggtatgaagggtcccactggacctgcaggacctgct
ggcctcacgggcagtcaaggactgccaggcccaccaggtccaccaggtttaccaggtacc
attgggcgaagcattgttgtcaaaggtgaccctggtcctccaggacctccaggactgcct
gggtcaaaagggccacctggactggcagggccacagggattgccaggtccagttggtgtt
cctggtgatccagggcgagacggactccctggttttgatggcccagcaggacgtaaagga
gagagaggtcttccaggccaaccaggttcacgaggaatacagggaccccctggtcctgat
ggcttacaaggcccacctgggcctcctggaacagcttctgttgctcacggattccttata
actcgtcacagccagactagggatacaccactatgtccacaaggaacttcaagaatatat
gatggattctctcttctgtatgtgcaaggaaatgagagagcccatggccaggacttgggt
actgctgggagctgtctcagacgttttagcaccatgcctttcatgttctgcaacatcaac
aacgtttgtaattttgcatcaaggaatgactattcctactggctgtcaactccagagcca
atgccgatgagcatggagcccctgaccgggcagaacattcagccattcattagccgatgt
gttgtgtgtgaagctcctgctatggtgatagctgtccacagtcagaccattcagattcct
tcgtgtcctccaggctgggactccctttggatcggttactctttcatgatgcacactagt
gctggagcagagggctccgggcaggccttggcatcacctggatcctgtttagaagaattc
cgctcagctccgtttattgagtgtcatggtcgtggcacttgtaactactatgccaattcc
tatagtttctggctggcaactgtagaggtgtcagaaatgttcagtaaacctcagtcagag
acactgaaagctggagacttgaggacgcgtattagtcgttgtcaagtttgcatgaagaag
acgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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