KEGG   Numida meleagris (helmeted guineafowl): 110407074
Entry
110407074         CDS       T06015                                 
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 homolog isoform X1
  KO
K14311  nuclear pore complex protein Nup188
Organism
nmel  Numida meleagris (helmeted guineafowl)
Pathway
nmel03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110407074 (NUP188)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nmel03019]
    110407074 (NUP188)
Messenger RNA biogenesis [BR:nmel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110407074 (NUP188)
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_SH3-like
Other DBs
NCBI-GeneID: 110407074
NCBI-ProteinID: XP_021269993
Position
16:5180407..5206838
AA seq 1737 aa
MAAGGLCARSSRELWTILLGRSALREPAQIASELNKHWQRLLEGLSYYKPPSTTSAEKIK
ADKDVAAPLKELGLRVSKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQALM
LKLADYYYEERICILRCVLHLLTYFQDERHPYTAQYFQCVEKLDKELVPNYRKQFEELYK
AEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPDELLAFAKLFKEQ
GFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTEEHKLANNAHV
HQEMDNQLLQLGDVSHHAPVLLAWALLRHTINPEESASVIRRMGSTAIQLNVFQYLTKLL
RSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWK
TEPTAGLGIILDSVCGMFPHLLTPLLQLLQALVSDKSTAKKVYRFLDKMSFYIELYKHKP
PDVISHEDGTLWRRQAPKLLYPLGLGQTNLRIPQGAVGQVMLDDRAYLVRWEYSYSSWTL
FTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT
TVIAPPMDVIASCVNCLTVLAARMPAKVWTDLHHTGFLPFVANPVSSMNHMISAEGMNAG
GYGNLLMSIEQPQGEYSVTISFLNLITTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKW
RYNSHGVREKIGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIM
GIGVDTIDMVMASQSSSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQ
HGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLT
RLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVVL
ELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPP
PSETSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKSLA
YYVAETEGSSCASMTEYQMLISAWRMLLIISTSHADIMHLSDPAVHEQLFLDVLSGTKAL
LLVPMSVSCLQLGSMLCTLLLILLRQWKSELGSVDKIINSLTQILEGVLQADQQMMEKTK
AKVFSALITVLQMKEMKVNEIPQYSQLVLSVCETLQDEVIALFDQTRHSLTLGDATDDKD
SMETDDASRVKHKDQRDGVCVLGLHLAKELCEVDDDGDYWLQITRKVPVLPTIFTALEIS
LRVKQNLHFTEASLHLLLTLARTQQGAAAVAGAGVTQSVCLPLLSVYQLSTNGAIQTSAS
SRKSQDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSL
ACLEEADHTVGFILQLSNFTKEWHFHLPQLMRDMQVNLCYLCQACTSLLHSRKMLQHYLQ
TKNGDSLPSSVTPRVQRNPQASSKHPSPESEAAEQKALLMVQYSLLKILSKSLAALRHFT
PDVCQILLDQSLDLAEYNVLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKKKE
PFPQAAGLNMQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSE
LSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHVQR
NT seq 5214 nt   +upstreamnt  +downstreamnt
atggcggcgggcgggctgtgcgcgaggagcagcagagaattgtggacaattctcctgggc
agatcagctttaagagaaccagcacagattgcatcagaactgaacaagcactggcagaga
ttgttagaagggctttcatactacaaacctccaagtacaacttcagcagagaagataaaa
gctgataaagatgtcgctgctccactaaaagagttgggtctgagggtcagcaagttcttg
ggactggatgaagagcagagtgtgcagttgttacagtgttatctccaagaagattacaga
ggaacaagggactccctgaagacagttcttcaggatgaaaggcagagtcaggctctgatg
ttgaagcttgctgactattactacgaagagaggatctgcattctgcgctgtgtcctccat
ctactcacttattttcaggatgagaggcacccttatacagcacagtacttccagtgtgtg
gaaaagttggacaaggaactagttcctaattaccgtaaacagtttgaagaactgtacaaa
gcagaagctcctacatgggaaacacatggaaatctaatgacagagcgtcaggtttctcgt
tggtttgtgcaatgcctccgtgagcagtccatgctcctggaagtcatcttcctctactat
gcatactttgaaatggcacctgatgagcttctggcatttgcgaagttgttcaaggagcag
ggatttggcactagacaaaccaacaggcacttggtagatgagagcatggatcacctggtg
gatcgtattggctacttcagtgctcttattctggtggaaggcatggaaattgactccctc
catgagcgcgctttggatgataggacagaggagcacaagttagccaataatgcacatgtc
caccaggaaatggacaatcagctgctgcagttaggagatgtctcacatcatgctccagtg
cttttggcttgggctctgctccgtcataccataaatccagaggagtcagccagtgttatc
aggagaatgggcagcactgctatccagctcaatgtgttccagtacctgacaaagcttctg
agatcacttagcagtgggggcaagaattgtactgccagcacagcatgtatgtgcatttat
gggcttctttcctttgtcctgacatcgctggaattgcatacgttgggcaaccagcaagat
ataattgatgcagcatgtgaagttctggcagcttccagcattcctcagctcttctggaag
acggaaccgactgcaggtctgggtattatcctggacagcgtatgtgggatgttcccccat
cttcttactcctctccttcagctgcttcaggctcttgtgtcagataaatctactgcaaaa
aaggtgtaccggttcctggataaaatgtccttctacattgaactctacaagcataaacct
cctgatgtgatctctcatgaagatggcacactgtggcgaagacaggctccaaagctcctc
tatcctctgggactaggtcagacaaatttgcggatacctcagggagcagtgggccaagta
atgctggatgatcgagcttatttggtacgatgggagtattcctacagcagctggacactg
tttacctgtgagattgaaatgctgctccatgttgtatccacagcagatgtgattcagcat
tgccagagggtcaagccaatcatcgatctggttcataaagtcatcagcactgatgtatcc
atagctgattgcctcctgccgatcacatcacgaatctacatgctgctgcagaggctgaca
actgtcatcgctccccctatggacgttattgcttcttgtgtcaattgtttgacagtgctg
gctgcacggatgccagccaaggtttggactgaccttcaccatacaggcttcttaccattc
gttgccaatccagtgtccagtatgaatcacatgattagcgcggagggaatgaatgctggg
ggctatggaaacctgctgatgagcatagagcagcctcaaggcgagtacagcgttaccatc
tccttcctgaacctcatcacaactcttgtccggggacaacttggtagcacccagagccaa
ggacttgtgccctgcattgtgtttgtcctgaaggagatgttaccaaattaccacaagtgg
cgttacaactctcatggagtgagagagaaaattggatgcctcattctgcaattgattcat
gccatactgaatttgtgccctgaaatggatcctcgcagtagcaatgcccccagccttcag
tccttgtgcatcttcagcctggccaacactgaagcagggcaagctgtcattaacatcatg
ggaattggtgtggacactattgacatggtgatggcctcccagtctagtagtgatgagtcg
caaggccaaggtcagctgctgatacaaacggttaagctggcgttctcagttaccaacaat
gtgatacgattgaaacccccctctagcgtggtatctccattagagcaggcacttactcag
catggtgctcatggaaacaatcttattgcggtcttggccaaatacatctaccacaagcac
gaccccgcgcttccacgcctggccatccagctgctcaagcgactggctacggttgctccc
atgtctgtttatgcctgccttggtagcgatgctgctgccatccgtgacgccttcctcacc
cgcctgcagagcaagattgaggacatgcgtattaaggtcatgatactggaattcctcacg
gttgcggtggagacacagcctgggctcatcgagctcttcctgaacttggaagtgaaggat
ggcagtgatggctcaaaggagttcagtttaggggagtggagttgcctccaagtagtctta
gagctgatagactccaaacaacaggagaggtactggtgtcctcccctcctgcaccgtgct
gccatcgccttcctgcacgccttgtggcaggaccgccgagatagcgccatgctcgttctg
aggacaaagccaaagttttgggaaaatttgactaatccactgtttgggactcttcctccg
ccttcagaaacgtcagagctcagtgtcttggatacctgtgccttaatcatgaaaatcatc
tgcttggagatctactatgttgtcaagggctccctggatcagtccctgaaagacacgctg
aagaatttctccaccaaaaagcgctttgcttattggtcagagtatgtgaaatcattggca
tattatgtggcagagacagagggcagcagctgtgcctccatgacagaatatcagatgctc
atctcagcctggcggatgctgctcattatatccactagccatgcggatatcatgcatctg
agtgaccctgcagttcatgagcaattgtttctggacgtgctcagtgggaccaaggctttg
cttctagttcccatgtcagtatcttgtctgcagctgggctctatgctctgtactcttctt
ctgatcctgctgaggcagtggaagagcgagttgggttctgtggataaaatcataaactcc
ttgacgcagattctggagggagtactacaggctgatcagcagatgatggagaaaaccaaa
gccaaagtgttctcagctcttatcactgtgctgcagatgaaggagatgaaagtgaatgag
atcccacagtactcccagctggtgctgagcgtgtgtgaaacgctccaggatgaggtcatt
gcactctttgatcagactcgacacagcctgaccttgggggatgctacagatgacaaggac
agcatggaaacggatgatgcctcccgagttaaacacaaggaccagcgagatggggtttgt
gttttgggtctgcatctcgcaaaagagctctgtgaagttgatgatgatggagattactgg
ctgcagattactaggaaggtccctgtgcttcctaccatcttcactgctttggagatcagc
ctgagagttaaacaaaaccttcacttcacagaggcctcgttacatctgctgctgacctta
gcaaggacgcaacagggagcagcagcagtggctggggctggtgtcacacagagtgtctgc
ctgcccctcctgagcgtgtaccagctcagcactaacggagccattcagacgtctgcctcg
tctcggaagtctcaggatgctccctcttggcctggggtctaccgcctctccatgtccctg
atggaacgtctcctcaagacactccgatacaactttctgacagaagcattggactttgtt
ggtgtccatcaagaaaggattctccagtgcctgaatgcagtacggacagtacagagcttg
gcctgtctggaggaggctgatcacactgttggcttcattctccagctctcaaatttcaca
aaggagtggcatttccacctgccacagcttatgagggacatgcaggtcaatctgtgttac
ctgtgtcaggcctgtacctccctcctgcacagccgcaaaatgctccagcactacctgcag
acaaaaaatggtgactcccttccgtcaagtgtgactccacgagtgcagcgtaatccccaa
gcctcctccaaacaccccagccctgagtcagaggcagcagagcagaaggcactgcttatg
gtgcagtacagcctcttgaaaatcctcagcaaatctcttgctgccctgcgccacttcacc
cctgacgtctgccagatactcctcgatcagtcactggaccttgctgagtacaatgtgctc
tttgtcttgagtttcaccacaccagcctttgattcagatgtcgcaccttcctttgggacc
ctgcttgccacagtcaacgtggccctcaacatgctgggagagttggataagaagaaggaa
ccttttcctcaagctgcagggctgaatatgcaagagggaaccaaaaccctcaagtctctg
ctcatgtttacaatggagaactgtttctacctgctcatctcccaagccgttcggtacttg
agagacccagctgtgcatccccgcgataagcagcggatgaaacaggagctcagctctgag
ctgagtacgctgctttccagcttgtctcgttatttccgccgtggtggtccctcttcacct
gccagcggggttcttccctctccccaggggaagtctgcctccaagctgggtcctgagggg
caggagcctttgtttcagctcgtgcaggccttcgtccggcacgtgcagagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system