KEGG   Natrialba magadii: Nmag_3231
Entry
Nmag_3231         CDS       T01176                                 
Symbol
fen1
Name
(GenBank) flap endonuclease Fen1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
nmg  Natrialba magadii
Pathway
nmg03030  DNA replication
nmg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Nmag_3231 (fen1)
   03410 Base excision repair
    Nmag_3231 (fen1)
   03450 Non-homologous end-joining
    Nmag_3231 (fen1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nmg03032]
    Nmag_3231 (fen1)
   03400 DNA repair and recombination proteins [BR:nmg03400]
    Nmag_3231 (fen1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nmg04147]
    Nmag_3231 (fen1)
DNA replication proteins [BR:nmg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Nmag_3231 (fen1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Nmag_3231 (fen1)
DNA repair and recombination proteins [BR:nmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Nmag_3231 (fen1)
Exosome [BR:nmg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Nmag_3231 (fen1)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: ADD06781
UniProt: D3SS07
Position
3350168..3351145
AA seq 325 aa
MGNAALRDIAVIEDVPFSEIEGVVAVDAHNWLYRYLTTTVKWTSSSKYTTADGTEVANLI
GIVQGLPKFFENDVTPVMVFDGGPSELKEDEIESRREQRQTYEEQLETAREEGDEVAIAQ
LESRTQRLTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVRRGDADYVGSEDYDALLF
GAPYTLRQLTSKGDPELMDLEATLDHHDLTLEQLIDAAILIGTDFNEGISGIGPKTALTE
ISEHGDLWSVLEARGETLEYGDRVRALFREPNVTDEYEFETTLDPDIEAAREYVTEEWGV
DADEVARGFERIEESVTQTGLDRWT
NT seq 978 nt   +upstreamnt  +downstreamnt
atgggaaatgctgctttacgcgacatcgccgtcatcgaggacgttccgttctccgaaatc
gagggcgtcgtcgccgtcgacgcgcacaactggctctatcggtacctgacgacgaccgtc
aagtggaccagcagttcgaaatacaccaccgcagacggcaccgaggtcgcaaacctgatc
ggcatcgtccagggactccccaagttcttcgagaacgacgtgacaccggtcatggtcttc
gacggcggcccctccgaactcaaggaagacgagatcgaatcccgccgcgagcagcgccag
acgtacgaagagcaactcgagaccgcccgcgaggaaggcgacgaggtcgctatcgcccaa
ctcgagtcgcgcacgcagcgactgacgccgacgatccaggagaccagccgtgaactcctc
cgattgctcgatgtgccgatcgtcgaagcgccggcagagggtgaggcacaggcggcccat
atggttcgacgcggcgacgccgactacgttggctccgaggactacgacgcactgctcttc
ggtgcaccctacaccctccgacagctcacgagcaagggcgatcccgaactgatggacctc
gaggccacactggaccaccacgacctcacactcgagcaactcatcgacgcggccatcctc
atcgggacggacttcaacgagggcatctcgggaatcggcccgaaaacggcactcacggag
atcagcgaacacggcgacctctggagcgtgctcgaagcgcgcggcgagacactcgagtac
ggcgaccgcgtgcgagcgctcttccgcgagccaaacgtgactgacgagtacgagtttgag
acgacactggatccggacatagaggcggcgcgagagtacgtgactgaggagtggggagtc
gatgccgatgaggttgcacgcgggttcgagcggatcgaggagagtgtgacacagaccggg
ctggatcggtggacctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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