KEGG   Neisseria mucosa ATCC 19696: NM96_12200
Entry
NM96_12200        CDS       T05436                                 
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
nmj  Neisseria mucosa ATCC 19696
Brite
KEGG Orthology (KO) [BR:nmj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nmj03032]
    NM96_12200
   03400 DNA repair and recombination proteins [BR:nmj03400]
    NM96_12200
Enzymes [BR:nmj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     NM96_12200
DNA replication proteins [BR:nmj03032]
 Prokaryotic type
  DNA Topoisomerases
   NM96_12200
DNA repair and recombination proteins [BR:nmj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NM96_12200
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4
Other DBs
NCBI-ProteinID: AVR79976
Position
2412549..2414855
AA seq 768 aa
MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKNGAVDPEHDFAMKYELIKRN
AKHVDAIVAGAKEAENIYLATDPDREGEAISWHLFEILKSKRGLKNIKPQRVVFHEITKN
AVLDAVANPREIEMDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
ERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGAKLEQFDLPNEAAQADVLKELEG
KEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGFTTDRTMRTAQQLYEGIDVGQGAIG
LITYMRTDSVNLADEALTEIRHYIENKIGKEYLPSAAKQYKTKSKNAQEAHEAIRPTSVY
RTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTVDIAVGKGVFRVTGQVQTFAG
FLSVYEESSDDEEGEDSKKLPEMSEGDKLPVDKLYGEQHFTTPPPRYNEATLVKALEEYG
IGRPSTYASIISTLKDREYVTLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQL
DEIADGKRRWIPVMDKFWKPFIKQVEEKEGIERAKFTTQELDETCPKCGEHKLQIKFGKM
GRFVACAGYPECSYTRNVNETAEEAAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGS
KFIGCANYPKCKHVEPLEKPKDTGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATW
NPPVAETCPKCAWPVLTIKTTKRWGVEKVCPQKECGWKEQIEPPAPKE
NT seq 2307 nt   +upstreamnt  +downstreamnt
atggcgaaaaacctcttaatcgtcgaatcaccgtccaaagccaaaaccctgaaaaaatac
cttggcggcgatttcgaaattctggcctcctacggccacgtccgcgacctcgtccccaaa
aacggtgccgtcgatcccgaacacgacttcgccatgaaatacgagctgatcaaacgcaac
gccaaacacgtcgatgctattgttgccggagccaaagaagccgaaaacatctacctcgca
accgacccggatagggaaggcgaagcgatttcctggcatctttttgaaatcctcaaatcc
aaacgcggcctgaaaaacatcaagccgcagcgtgtcgtgttccacgaaatcaccaaaaac
gccgtgctcgacgccgtcgccaacccgcgcgaaattgaaatggacttggtcgatgcgcaa
caagcccgccgcgctttggactatctggtcggtttcaacctctcgccattgttgtggaaa
aaaatccgccgcggtttgagcgcgggccgtgtgcaaagtcccgccctgcgtttgatttgc
gaacgcgaaaacgaaatccgtgcctttgaagcgcaggaatattggacggtgcatctcgac
agccacaaaggccgcagcaagttcaccgccaaactcgcccaatacaacggcgcgaaactc
gaacaattcgacctgccgaacgaagccgcgcaagccgacgtgttgaaagaactcgaaggc
aaagaggcagtcgttaccgccatcgaaaagaaaaagcgcagccgcaatcccgccgcgccg
ttcaccacttctaccatgcagcaggatgccgtacgcaaactcggcttcaccaccgaccgc
accatgcgtaccgcccagcagctttacgaaggtatagacgtagggcagggcgccatcggt
ctgattacctatatgcgtaccgacagcgtgaatttggccgatgaagcgttaaccgaaatc
cgccattacatcgaaaacaaaatcggcaaagaatatctgccgagtgccgccaaacaatac
aaaaccaaatccaaaaacgctcaagaagcccacgaggcgatccgtccgacttccgtgtac
cgtacgcccgaaagcgtcaaacccttcttgagcgcagaccagttcaaactctatcaaatg
atttggcagcgcaccgtcgcctgtcagatgacgcccgccaaattcgaccaaaccaccgtc
gatattgccgtcggcaaaggcgtattccgcgtaaccggacaagtgcaaaccttcgcaggc
ttcctcagcgtttacgaagaaagcagcgacgatgaagaaggcgaagacagcaaaaaacta
cccgaaatgagcgaaggcgataaattgcccgtggacaaactctacggcgaacaacacttc
accaccccgccgccgcgctacaacgaagctacattggttaaagccctcgaagaatacggc
atcggccgcccctcgacctacgccagcatcatctccacgctcaaagaccgcgaatacgtt
acccttgagcaaaaacgcttcatgcccaccgacacaggcgacatcgtcaacaaattcttg
accgaacacttcgcccaatacgtcgactaccacttcaccgccaaactcgaagaccagctc
gacgaaatcgccgacggcaaacgccgctggattcccgtgatggacaaattctggaaaccg
ttcatcaagcaagtggaagaaaaagaaggcatcgaacgcgccaaattcaccactcaggaa
ctcgacgaaacctgcccgaaatgcggcgaacacaaattgcaaatcaagttcggcaaaatg
ggccgcttcgtcgcctgcgccggctatcccgagtgcagctacacgcgcaacgtcaacgaa
accgccgaagaagccgccgagcgcatcgccaaagccgaagctgagcaagccgaactcgac
gggcgcgaatgccccaaatgcggcggacggttggtgtacaaatacagccgcaccggcagc
aaattcatcggctgcgccaactaccccaaatgcaaacacgtcgagccgctggaaaaaccg
aaagataccggcgtccaatgcccgcaatgcaaaaaaggcaacctcgtcgagcgcaaatcc
cgctacggcaaattgttttacagttgcagcacctatcccgactgcaactacgccacttgg
aatccgcccgtcgccgaaacctgtccaaaatgcgcatggccggtactgaccatcaaaacc
accaaacgctggggcgtggaaaaagtctgcccgcaaaaagaatgcggctggaaagaacag
attgaaccacctgcaccgaaagagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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