KEGG   Nipponia nippon (crested ibis): 104008601
Entry
104008601         CDS       T05756                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni03020  RNA polymerase
nni03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nni00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104008601 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104008601 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nni03021]
    104008601 (POLR2D)
   03400 DNA repair and recombination proteins [BR:nni03400]
    104008601 (POLR2D)
Transcription machinery [BR:nni03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     104008601 (POLR2D)
DNA repair and recombination proteins [BR:nni03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104008601 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 BIG2_C Tfb4 Rop Maelstrom
Other DBs
NCBI-GeneID: 104008601
NCBI-ProteinID: XP_009458773
Position
Unknown
AA seq 138 aa
MMMNKNKERWLKRGKKSLKIEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEVFMKT
LNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEGRFED
EELQQILDDIQTKRSFQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atgatgatgaacaaaaacaaggagagatggctaaaaagggggaaaaaatctcttaagatt
gaatttgaaactgcggaaactcttctaaattcagaagtacatatgcttctcgagcatcgt
aagcaacagaatgagagcgcagaagatgagcaggagctttcagaagtcttcatgaaaacc
ttgaactacacagcgcgcttcagccgcttcaaaaaccgtgaaaccattgccagtgtccgt
agtttgctgctccagaaaaagctccataaatttgaactggcgtgtttggctaacttgtgt
cctgagacagctgaggaagcgaaagctttgattcctagcctggagggccgatttgaagat
gaagaattacagcagattcttgatgacattcagactaaacgcagcttccagtattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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