KEGG T05756: 104009781

Nipponia nippon (crested ibis): 104009781

Entry

104009781         CDS       T05756

Symbol

DDX18

Name

(RefSeq) ATP-dependent RNA helicase DDX18

K13179

ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]

Organism

nni Nipponia nippon (crested ibis)

Brite

KEGG Orthology (KO) [BR:nni00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nni03041]
    104009781 (DDX18)
   03009 Ribosome biogenesis [BR:nni03009]
    104009781 (DDX18)
Enzymes [BR:nni01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104009781 (DDX18)
Spliceosome [BR:nni03041]
Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    104009781 (DDX18)
Ribosome biogenesis [BR:nni03009]
Eukaryotic type
  90S particles
   Helicases
    104009781 (DDX18)
  Pre-60S particles
    104009781 (DDX18)

SSDB

Motif

Pfam:

DEAD Helicase_C DUF4217 ResIII AAA_30

Other DBs

NCBI-GeneID:

104009781

NCBI-ProteinID:

XP_009460077

Position

Unknown

AA seq 588 aa
MVRDLNKASLPPRAESLLQTPKSARFHFPPCRRGFVSWAVQNTEPKKVKTEEDESVEVED
EDKQDSGENEVEEEEGEEDEVPSLPLGVTGAFEDNSFTSLAGVVSENTLKGINDMGFTHM
TEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTRE
LAMQTYGVLKELMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGF
MYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKE
PLYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHY
ELLNYIDLPVLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDP
PDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQ
SQLEKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYNVNNLDLPKVSLSFGFKVPPFVD
LNVNSNHGRRLQKRGGGGGFGYQKSKNVHKAKIFKHISKKSDSRQFSR

NT seq 1767 nt +upstreamnt +downstreamnt
atggtacgtgatcttaacaaagccagcttgcctccgcgggctgagtcactcctgcagacc
ccaaaaagcgcccgctttcattttccgccctgtcggagaggattcgtcagctgggccgtg
caaaatacagaacctaaaaaagtgaaaactgaagaagatgaatctgtggaggtagaagat
gaagataagcaggattctggagagaacgaagtggaagaggaggagggggaggaggatgaa
gtgcccagtttaccactaggtgtaacaggtgcttttgaagacaattcttttacttccctg
gctggtgttgtcagtgagaatacattgaaaggcataaatgatatgggctttacgcacatg
actgaaattcagcataaaagtattaagccgcttctggaaggcagggatattttagcagct
gcaaaaacaggcagtggtaaaacacttgcgtttcttattcctgcggtagaactcatctac
aagctgaaattcatgcctagaaatggaacgggtgttattattctttctcctactcgagag
cttgctatgcaaacgtacggagttctgaaagaacttatgaatcatcatgttcacacctat
ggtctgataatggggggcagtaaccgatcagcagaagcacagaaacttggaaacggaatc
aacatcattgtagcaacaccaggaagactgctggatcatatgcagaacactccaggtttc
atgtacaagaacttgcagtgtttggtaattgatgaggcagatcgtatcttggaggttgga
tttgaagaagagatgaaacagatcataaaacttctaccaaagcgcagacagacaatgctt
ttttctgctacgcaaaccagaaaggttgaagatctggcaaagatctctctgaagaaagag
ccgctctatgttggggttgatgataacaaggagacggcaacagtagatggtcttgaacag
gggtatgtagtgtgtccatctgaaaaaagattccttttgctcttcacattcctcaagaag
aaccggaagaagaaactaatggtatttttttcttcatgtatgtcagtgaagtatcactat
gaattactcaactatattgatctgcctgttttggccattcatggcaagcagaaacaaacc
aaacgtactacgacatttttccagttctgtaatgcagaatctggaatactgttgtgcact
gatgtagctgccagaggactggatattcctgaagttgactggattgtccagtatgaccct
ccagacgatccaaaagaatatattcatcgtgttggtagaactgccagaggcataaatggt
agaggacatgctctgctcattttacgaccagaagaactgggctttcttcgttacctaaag
caagccagggtaccactaagtgaatttgaattttcctggtcaaaaatttctgacatccag
tctcagctggagaaactgattgagaagaactacttccttcacaagtcagcccaggaagca
tacaaagcttacattagagcttatgactcccattctctgaagcagatctataacgtcaat
aacctggatcttcccaaagtcagcctttcatttggttttaaagttcctccgtttgttgac
ctcaatgtgaacagcaaccatggcagaagactacagaaaagaggtggaggtgggggattt
ggttaccagaaatcgaagaacgtccacaaagctaaaatcttcaaacacattagcaagaaa
tcggacagtaggcagttttctcgttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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