KEGG   Nipponia nippon (crested ibis): 104009885Help
Entry
104009885         CDS       T05756                                 

Gene name
DHX8
Definition
(RefSeq) ATP-dependent RNA helicase DHX8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nni00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104009885 (DHX8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nni03041]
    104009885 (DHX8)
Enzymes [BR:nni01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     104009885 (DHX8)
Spliceosome [BR:nni03041]
 Complex C
  Other components
   Step II factors
    104009885 (DHX8)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: OB_NTP_bind HA2 S1 Helicase_C DEAD AAA_22 T2SSE AAA_19 PRP38_assoc Flavi_DEAD AAA_30 AAA_16 PhoH Transformer Sigma54_activ_2 ABC_tran Spem1
Motif
Other DBs
NCBI-GeneID: 104009885
NCBI-ProteinID: XP_009460196
Position
Unknown
AA seq 1113 aa AA seqDB search
MRPPTKPFTSKETAVKPKSEKEKLKELFPALCRPDNPNIRNMLDEDDVKVAADALKELEA
LMPSADRQGRQRSSDHRAKKKRRSRSRSRDRKRRHRSRSRSRSRTRDKNRGKSRYRSRSR
SRSPSRDRKDREKYVEKSSERWRDKHIDRPPPEEPSIGDIYNGKVTSIMQFGCFVQLEGL
RKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLN
PNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDSLERKRLTRISDPEKWEIKQMIA
ANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKN
PDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRG
IGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVI
GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR
FEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQK
RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQI
HLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDP
APPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQR
AGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMD
APPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLT
IVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFI
QARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTL
IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPT
KLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq 3342 nt NT seq  +upstreamnt  +downstreamnt
atgcggcctccgacaaagccatttacgagcaaagagacagctgtcaaacccaaatcggag
aaggaaaagttgaaggaattgtttccagccctttgcaggccagacaatcccaacatcagg
aacatgctggatgaagatgatgtgaaagtggcagctgatgcacttaaagaacttgaagct
ctgatgcctagtgcagacaggcagggcaggcaaaggagcagcgaccaccgggcaaagaaa
aagaggaggagccgcagtcgtagcagggacaggaagcgaaggcacaggtctcgctctagg
tctcgttcgaggactcgggacaagaacaggggaaaatccagataccggtcaaggagcaga
agtcggagtcccagcagggaccggaaggatcgagagaagtacgtcgagaagagcagtgag
agatggagagacaagcacatagaccgtccgccacctgaggagccttccatcggagacatt
tacaatggcaaagtcacgagtataatgcaatttggatgctttgtgcagctggaaggacta
aggaagcgttgggagggcttggtccacatctcggagcttcgaagagaaggacgggttgcc
aatgttgccgatgtcgtgagcaaaggacaaagagtaaaagtcaaagtgttatcctttact
ggatccaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacttgaac
ccaaatcggaggagaaacctggtcggagaaaccaatgaagaaacctctatgagaaaccca
gacagacccagtcacctgtccctggtgaatgcgccggaggtggaggatgatagcctcgaa
cggaaacgcctcacccgaatttcagacccggagaaatgggaaataaaacagatgattgca
gctaatgttctttccaaggaggagtttcctgacttcgatgaggagacggggattcttcct
aaagttgatgatgaggaagatgaggaccttgagattgagttagttgaagaagagccaccg
ttccttcgaggtcatactaagcagagcatggatatgagtcccatcaaaatagtaaagaat
ccagatggttccttgtcccaggctgcaatgatgcagagtgccttagctaaagaaagacga
gaacttaaacaagcccagagagaggcggagatggattctatccccatgggactcaacaca
cactgggtggatcctctccctgatgtggatggaagacaaatagctgcaaacatgcgaggt
attgggatgatgcccaacgatatcccagagtggaagaaacatgcatttggtggcaacaaa
gcttcttatggtaagaagacccagctttccatcattgagcagagagagagtctcccaatc
ttcagactgaaggagcagctgatacaggctgtgcacgacaaccagattctgattgttatt
ggagagacaggatctgggaagacaacacagattacccagtacctggctgaggcggggtat
acatcaagaggaaagattggatgcactcagcctcgccgagtggctgcaatgtctgttgca
aagagggtgtcagaggaatttggttgctgcctgggacaagaggttggctacaccattcga
tttgaagactgcactagccccgaaactgtcatcaaatacatgacagacggtatgttactg
agggagtgcctgatagatcctgatctgactcagtatgccattatcatgctggatgaagcc
cacgagaggaccatacataccgatgtgctctttggactcctgaagaagacagtgcagaaa
cggcaggatatgaagttgatagtgacgtccgcaacgctggatgctgtgaaattctctcag
tatttctacgaagcgccaatcttcacaattcctggcagaacgtacccagtagaaattctg
tacacaaaggagccagagacagattatttggatgccagtctgattacagtaatgcagatc
cacttaacagagccaccgggtgacattttggtgtttctaactggtcaggaagagattgac
actgcctgtgaaatcctttacgagaggatgaaatctctaggacccgatgttccagagtta
attatcctgccagtatattcagctcttcccagtgaaatgcaaaccaggatctttgaccca
gccccaccaggaagcagaaaggttgtcattgccactaacattgctgagacatctttgacc
attgatggaatatattacgtagtcgatcctggcttcgtgaagcagaaagtttacaactcc
aagactggaatcgaccagctggttgttacgccgatttcacaggctcaagcaaagcagcga
gcaggaagggctggcagaaccggaccaggaaaatgctacaggttatatacagagcgtgct
tatcgagatgaaatgctaaccaccaacgtgcctgaaatccagagaacaaatttggccagt
acggtactttccctgaaggccatgggcatcaatgatttgctctcctttgactttatggat
gctcccccgatggaaacactcataactgccatggagcagctgtacaccctgggagctctg
gatgatgagggactgctcactcgacttgggcgcaggatggcagagttccccttggagccc
atgttgtgtaagatgttgatcatgtctgtacatctgggatgcagtgaggaaatgctgaca
atagtctccatgctgtccgtacagaacgtgttctacaggccaaaggataaacaagcactt
gctgatcaaaagaaagccaagttccatcagacagaaggtgaccacctcactctgctggct
gtgtacaattcctggaagaataataagttttcaaatccctggtgctatgaaaattttatc
caggcccgatccttacgccgggcacaggacatccgcaagcagatgttgggcatcatggac
aggcacaagctggatgtggtatcctgtgggaaggcaacagttcgagtccagaaggccatc
tgtagtggcttcttccgaaatgcagcaaagaaggatccccaggaaggttatcggacactc
attgatcaacaagtagtctatatccacccatccagtgctctcttcaacaggcagccagaa
tgggtggtgtatcacgagctggtgctgaccaccaaggaatacatgcgcgaagtgacaacc
attgatcctcgctggctggtggaatttgcaccagctttcttcaaggtttctgacccaacc
aagctgagcaaacagaagaagcagcagcggctggaacccctgtacaatcgctacgaggag
cccaatgcttggaggatatcgcgtgcattcaggcggcgatga

DBGET integrated database retrieval system