KEGG   Nipponia nippon (crested ibis): 104013802
Entry
104013802         CDS       T05756                                 
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
  KO
K15710  E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.- 2.3.2.27]
Organism
nni  Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:nni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nni04121]
    104013802 (SHPRH)
Enzymes [BR:nni01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104013802 (SHPRH)
Ubiquitin system [BR:nni04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104013802 (SHPRH)
SSDB
Motif
Pfam: SNF2-rel_dom SHPRH_helical-1st SHPRH_helical-2nd Linker_histone Helicase_C zf-RING_UBOX PHD zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 PEP-utilisers_N TPR_12 TRAF3_RING
Other DBs
NCBI-GeneID: 104013802
NCBI-ProteinID: XP_009464618
Position
Unknown
AA seq 1657 aa
MSSRRKRAPPSKIDEEKKKQLCWNMHEDRRNEVITLDDEMTNEDHVPGPSTSSSSFVVIN
DDSTDEDLIQKEGSGSKSVKFLTVNDEEDSYSILTPVSVQLNIIVLPYRADGSWKALLGE
FVLRLPSEQILTNKFHERSFTLMRGDSDDQLQVCVHERSEEEYSNETKEYLGAYEQRILV
ETTLGGEILEGLRWLQKKKIIGLYQRPGEAQALKVGIYLLEAGLSKPEFLSDGGGRPKKA
NQLIQKLMEKFYSFLIPDELEEDEEESDMELERQNIEELYDFVRHTHQQDIQLLREDVQH
PALIPILRPYQSEAVNWMLHRENLTSTPTSENALHFLWREVITLDGVKIYYNPFTGCIIR
EYPIAGPQWPGGILADEMGLGKTVEVLALILTHTRPDIKQDDLTLPEGKLVNFFVPPQPL
EGNKKKKTKEMELKLKEKIQYPSLRVMILAAVKEMNVKKGASIIAIFKYISAIYRYDIQR
NRRLLKRTLEKLIAEQVVEQVKGHGLAGSFKLGKNYKEQKRRERTKEQIAKTSESIQKKQ
LIDAKTQTKESRNSDVTSENVLKTPLRVDITMEEHDYCTTSKNNKKSEADHKNSVKENNE
IPKDPSSHSQEHAGSSIQHTSSVFPFNTSEYRFECICGELGLADYKARVQCLKCYLWQHA
ECVNYKEENLKIKPFYCPHCLVAMKPVSTGATLIISPSSICHQWVDEINRHVRSSSLRVL
VYQGVKKHGFLQPHMLAEQEVVITTYDVLRTELNYVDIPHSNSEDGRRFRNQKRYMAIPS
PLVAVEWWRICLDEAQMVECTTAKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLG
VDPYWVKHWWDQLLYRPYCRKNPRPLYSLIAKIMWRSAKKDVIDQIQIPPQTENVHWLHF
SPVERHFYHRQHEVCCQDALAKLRKISDWTLKLSSLDRRTVTSILYPLLRLRQACCHPQA
VRGEFLPLQKSTMTMEELLTSLQKKCRTECEEAHRQLVCALNGLAGIHIIKGEYAFAAEL
YREVLRSSEEHKEKLKTDSLQRLHSTHNLMELLLAKHPGIPPTLRDSRLAEEAEQLRQHY
MSKSNAEVAEAHQALQPVLQTIRELQRKIHSGSPWWLDVIQTAIQYAIDEELVQRVQNEI
TSNYKQQINKLSMAEKFRDCRGLQYLLTTQLEEVKKFQKIVREAVKNLEGPPSKQVIEAA
TICHLRPVRLPLNNCVFCKADELFTEYESKLFSHTVKGQMAIFEEMIEDEEGLVDDRLPT
TSRGLWATSETERALKAILSFAKAHRMDVKLTEEGSIFLELFEAWKKEYKLLHEYWMVLR
DHVSAIDELAMATERLRVRHPDEPKPNPPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKK
LGQLLYLTNLEKSQDKTTGGVNPEPCPICARQLGKQWAVLTCGHCFCNECIAIIIEQYSV
GTRRSSIKCAICRQTTSHKEISYVFTAETANQEDDIPVKGSHSTKVEAVVRTLKRIQFKD
PGAKSLVFSTWQDVLDIISKALYDNNMIFSQINGISKFQENLSAFKYDPNINILLLPLHT
GSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKSTIVHRFLIKATIEERMQTML
KTVDRSHTSSSMKQSEASVLTVADLADLFTEETEELE
NT seq 4974 nt   +upstreamnt  +downstreamnt
atgagtagtcgtcgaaaacgtgcacctccatcaaagatagatgaggagaagaagaagcag
ctctgctggaatatgcatgaagaccgcagaaatgaggtgataacattagatgatgaaatg
actaatgaggaccacgttccaggtccaagcacttcttcttcatcctttgttgttataaat
gatgatagcactgatgaagatcttattcaaaaagaaggcagtggctcaaaatctgttaag
tttttgacagttaacgatgaagaagactcttattccatcttgactcctgtgtcagtacag
ctaaatattatagtcttgccataccgtgcggatgggtcctggaaagctttgttgggagaa
tttgttcttcgtcttccttctgagcaaattctaactaacaaattccatgaaaggagcttt
acgttgatgagaggagactctgatgatcagttgcaggtctgtgttcatgaaagaagtgaa
gaagagtacagtaatgaaacaaaagaatacctgggtgcttatgaacaacgtattttggtg
gaaacaactttaggtggtgaaatattggaaggcttgagatggttgcaaaagaaaaagata
attggactttatcaaagacctggagaggctcaagctttaaaggttggaatttaccttctg
gaagctgggctaagtaaaccggagtttctcagcgatggaggtggaagacccaaaaaagct
aatcagctgattcaaaaactcatggaaaagttctatagttttttaattccagatgagctg
gaggaagatgaggaagaatctgacatggaactagagcgacaaaatattgaagagctttat
gactttgtaaggcacacccatcagcaggatatccagttactgagagaggatgtgcagcat
cctgcgttaattcctattctgaggccataccaaagtgaggctgtgaactggatgcttcac
cgagagaacctcacaagcactccaaccagtgaaaatgcactgcacttcttatggcgagag
gtcatcactctggatggagtgaaaatctactataatccatttactggctgtattatccgt
gaatatccgattgctggaccccagtggcctggaggtattttggcagatgagatgggtctt
ggaaaaacagtagaagtgttggctcttattctgactcatacccgaccagacattaaacaa
gatgatctgacattacctgagggtaagctcgtgaacttctttgttccacctcaaccttta
gaaggaaataaaaagaaaaaaacaaaggaaatggagcttaaattgaaggaaaaaatacaa
tatcccagcttacgagtgatgatattagcagctgtaaaggaaatgaatgtgaagaaagga
gcatccattattgcaatatttaagtacatcagtgctatatataggtatgacatacagaga
aatagacggcttctcaaaagaactctagaaaaactaattgcagaacaagtagtagagcaa
gtcaaaggacatggtctggctgggtctttcaagttgggaaagaattacaaggaacagaag
aggcgagaaagaaccaaagagcagatagcaaagacttcagaaagcattcagaagaagcag
ttgattgatgctaaaactcaaaccaaagaatcaagaaatagtgatgtcacttctgaaaat
gtccttaaaacccctttacgggtagatatcaccatggaagaacatgattattgtacaact
agcaaaaataacaagaaatctgaagcagatcataagaactctgtaaaagagaataatgaa
atcccaaaggacccatcctcacattcccaagaacatgccggcagtagcatacaacatacc
agttctgtatttccatttaatacatctgaatatcgttttgaatgcatctgtggtgagctt
gggttggctgactataaagctcgtgtgcagtgcctgaaatgttacttatggcagcatgca
gaatgtgtaaactacaaagaggaaaacctgaagatcaagcccttctactgtccccattgc
ctcgtggcaatgaaaccagtttccacaggagcgacactgataatttctccgagttctatt
tgtcatcagtgggtagatgagatcaacaggcatgtaagatcatcttctcttcgagttctg
gtgtatcaaggtgtgaagaagcatggctttttgcagccacacatgttggcagagcaggag
gtggttatcaccacatatgatgttctccgcactgaactgaactatgtagatataccccac
agtaacagcgaagatgggcgccgtttcaggaaccagaagcggtacatggccatcccaagc
cccttggtagcagtggagtggtggaggatctgcctcgatgaagcacaaatggttgaatgc
actaccgcaaaggctgctgaaatggcactccgtttaagtggaatcaatcgctggtgtgtc
agtggcactcctgtgcagcgaggattagaagatctttatggattagtcctttttcttgga
gttgatccttactgggtcaaacattggtgggaccaacttttatatcgaccttattgtagg
aaaaatccccggcctctctacagtctaattgccaagataatgtggagatcagcaaagaag
gatgtgattgaccaaattcaaatcccccctcagacagaaaatgtacactggcttcacttt
tctcctgtggagagacacttctatcatcgccagcacgaggtgtgctgccaggatgcattg
gcaaaactcaggaagatttcggactggactctgaagcttagtagcctggatagaaggact
gtgacttctattctgtaccctttgctgcggctgaggcaggcctgctgtcatccacaagct
gttcggggagagttcttgccattacagaaaagcaccatgaccatggaggaactgctgaca
tctctgcagaagaaatgtcgaacggagtgtgaggaagctcaccgacagttggtgtgtgct
cttaatggcttagctggtatccatattattaaaggagaatatgcattcgctgcagagctg
tacagagaagtgttacgatcatctgaagagcacaaagaaaagctcaaaacagattccttg
caaagacttcattctacacacaatttgatggaattgttgttggcaaagcacccaggaatt
cccccaactctgcgtgacagccgacttgcagaagaggcagaacaacttcgacagcattat
atgagtaagtccaatgcagaagttgcagaagcccatcaggctttacagccagttcttcag
accattcgggagctccagagaaagatacattcaggttctccttggtggttggatgtcatc
cagacagcaatacagtatgccatcgatgaggagcttgttcaacgtgtgcaaaatgaaata
accagcaactacaaacagcagattaataagctctccatggcagagaaattccgtgactgc
agaggccttcaatacctgctcacaacccagctggaggaagtgaagaagttccagaagatt
gtaagagaagcagtgaaaaacttagaaggccctccctctaagcaggttattgaggctgcc
actatctgccatttgcgacctgttagacttccacttaacaactgtgtcttttgtaaggct
gatgagctgttcacagaatacgaatcaaagctcttctctcatactgttaaaggccaaatg
gcaatatttgaggagatgatagaagatgaagaagggcttgttgatgaccgtttgcccacc
acaagtagaggactgtgggcaaccagtgaaactgaacgtgccttgaaagctattctctcc
tttgccaaagctcaccgaatggatgttaagctaaccgaagagggcagcatatttctggaa
ctctttgaagcatggaaaaaggaatataagttacttcatgaatattggatggtactaagg
gatcacgtgtctgctattgatgaactggcaatggctacagaacggctgagagtgcgtcat
cctgatgagccaaaaccaaatccaccagttctccacatcatagaaccgcatgaggtagag
caaaatcgagtgaaacttttgaatgacaaggcagttgccaaatcacagcttcaaaagaaa
ttaggacaacttctgtatctcactaatctggagaaatctcaggataaaactaccggggga
gttaacccagaaccatgtccaatctgtgcacgtcaactgggaaaacagtgggcagtgctg
acgtgcggacattgtttttgtaacgagtgtatagctatcatcatagaacagtacagcgtt
ggcacccgccggagctcaattaaatgtgccatttgcaggcagacaacatctcataaagaa
atatcgtatgttttcactgcagaaactgcaaaccaagaggatgatattcctgtaaaggga
agtcactccaccaaagtggaagctgtggtccgaacactgaagagaattcaatttaaagat
ccaggggctaaatccttagttttttcaacgtggcaagatgtgttggacataatttcaaaa
gcattgtatgacaacaacatgattttttcccagatcaatggaattagtaaatttcaggaa
aatctctctgcatttaaatatgatcccaacatcaatattttgctgctgcctcttcacact
ggttccaatggcctaaacatcatcgaagcaactcacgttctgcttgtggaacccattctg
aatcctgcacatgagctacaggctattggcagagtacatcgtattggccaaacaaaatct
accattgttcataggttcctgataaaagcaacaatagaagagagaatgcagactatgctg
aaaactgtagatagaagccacacgagctcttccatgaaacagtcagaagcctcagttctg
acagtggcagatttggctgacctttttacagaggaaactgaagaacttgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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