KEGG   Nipponia nippon (crested ibis): 104017588
Entry
104017588         CDS       T05756                                 
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104017588 (POLB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nni03400]
    104017588 (POLB)
Enzymes [BR:nni01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     104017588 (POLB)
DNA repair and recombination proteins [BR:nni03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     104017588 (POLB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     104017588 (POLB)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 HHH_5 NTP_transf_2 HHH_2 Cdd1
Other DBs
NCBI-GeneID: 104017588
NCBI-ProteinID: XP_009468904
Position
Unknown
AA seq 421 aa
MCMKLKQFCEKPDLVADVLCPLVKVLAVNEMVLGQAASLAGSVRAPLVPAEGNVAPPLRA
RQRVPLLPGRAAARLARRAVGCRAAPQALPGPDPGRLGGLQIVICSRVWPVAFKGSKAPR
KTFPSGKAASVISRYPSKIRSGAEAKKLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTS
ASINFLTRVTGIGPAAARKFVEEGVKTLEDLRKNEHKLTHHQRIGLKYFEDFEKRIPREE
MLQMQEIVLKEVKKLDPDYIATVCGSFRRGAESSGDMDVLLTHPSFTSESSKQSKLLRQV
VEQLEKVHFVTDVLSKGDTKFMGVCQLPDKEDGTAYPHRRIDIRLIPKDQYYCGVLYFTG
SDIFNKNMRAHALEMGFTINEYTIRPLGVTGVAGEALPVECEKDIFDYIQWKYREPKDRS
E
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtgcatgaagctaaagcagttttgcgagaagccggaccttgttgcggatgttttgtgc
cctctggttaaagttttggccgtaaatgagatggtgctggggcaggcggcgtcccttgct
gggagcgtccgtgccccgctggtccctgccgaggggaatgtggcccctccgcttcgggcg
cggcagagggtgcccctgcttcccggcagggctgctgcccgcttggcacgcagggccgtg
ggatgccgtgctgcgccacaggccctgcccgggccagatcccggccgcctcgggggactt
cagatcgtcatctgctcccgagtctggcccgtagccttcaagggctcgaaggcccccagg
aagacatttcccagtgggaaagcagcctcggttatttcccggtatcccagcaagatacgg
agcggggccgaagccaagaagctggatggagttggtgctaaaatagcagagaagatagat
gagttcttatccactggaaaactacgcaaattggaaaagattcgacaagatgatacaagt
gcatctatcaatttcctgacacgcgttactggcattggtcccgctgctgctaggaagttt
gtcgaggaaggagttaagactttagaagatctaagaaaaaatgagcacaagctgacccat
caccagcgaattgggttgaaatattttgaagattttgagaaaagaattccaagagaagaa
atgctgcagatgcaggaaattgtgctgaaagaggtaaagaagctggacccagactatatt
gctacagtctgtggcagttttagacgaggagcagagtcaagtggcgatatggatgttctc
ctaacccatccgagtttcacatcggaatcatccaaacagtcaaaacttctgcgtcaagtt
gtagaacaactggaaaaagtccactttgtcacagatgtgctgtctaaaggtgacaccaaa
ttcatgggcgtctgtcagctgccagataaagaagatggaacagcctatccacataggaga
atcgacatccggcttatccccaaagatcagtattactgcggtgtactgtatttcaccgga
agtgatatattcaataagaacatgagagctcatgctctggaaatgggcttcacaatcaac
gagtatacaatccgtcccttgggtgtcactggagttgctggggaggccctaccagtagaa
tgtgaaaaagacatctttgactatatccagtggaaatatcgagagccaaaggatcggagt
gaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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