KEGG   Nipponia nippon (crested ibis): 104017853
Entry
104017853         CDS       T05756                                 
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni03013  Nucleocytoplasmic transport
nni03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nni00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104017853 (SRRM1)
   03015 mRNA surveillance pathway
    104017853 (SRRM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nni03019]
    104017853 (SRRM1)
   03041 Spliceosome [BR:nni03041]
    104017853 (SRRM1)
Messenger RNA biogenesis [BR:nni03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104017853 (SRRM1)
Spliceosome [BR:nni03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    104017853 (SRRM1)
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 104017853
NCBI-ProteinID: XP_009469204
Position
Unknown
AA seq 889 aa
MINGKKNLDIRATPQAEPGFVTIYVKQGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDM
SKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNARE
FMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKD
NREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATP
EPEPSVKPKETVVQEATSNSDIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSP
TRSKSRSRSRSRSPSHSRPRRRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSP
VRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSP
PASPPPKPRRSPTPQQSNRARKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSES
EEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSH
SRSPSPSPRKRQKESSPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPR
RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSP
AAKRRSPSISSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPRRGASAS
PQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPP
SPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKH
KKEKAAAAAAAAALLLWLQQIPPPYRKTRKQRQNPKRRQKVNQKTTLMI
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgataaatgggaagaaaaatttggacatacgagctacacctcaggctgaacctgggttt
gttacgatttatgtgaaacagggaacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagctgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacggaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctgttaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacagcgacagattgagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggaaaagagggataaggaagacaaagac
aacagagaaaaaagagacagatccaggagtccaagaagacgcaaatcaaggtctccttcc
cctcgaaggaggtcgtcgcctgtcagaagagagcggaaacgcagccattctcgctcccct
catcacagaaccaagagccgtagtgctactcctgcaccagaaaagaaagaggcgactcct
gagccagaaccctctgtgaaaccaaaggagactgttgttcaagaggcaacttcaaacagt
gatatcccaaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggaaaaagagaagactcgtcaaagatcccca
actcggtccaagtcaaggtcaagatctcgatcacgttctccatctcattctcgacccaga
aggcgtcatagatcacggtcaagaaggcgaccaagcccaagacgacggccgtctccaagg
agaaggagccctccaaggcgaatgcctcccccacccagacacagaagaagcagatctcct
gtgaggcggagaagacggtcatcagcatccttatctggcagtagctcttcctcctcctcc
tcacgttcccgatcaccaccaaagaaaccacctaaaagaactgtatccagtcctcctcgt
aaaacgcgtaggctctctccttcggcaagccctcctaggcggaggcacagaccatcccca
ccagcaagtccacctccaaaaccacgtaggtctccaacaccccagcagtcgaatcgtgca
agaaaaagccgtggctctgtttcgcctggcagagcatcagcgcccaaacataagagtact
gaaaaaagagaatctccttcgccagcaccaaaaccaaggaaagcagaactgtctgaatcg
gaagaagataaaggaggtaaaatggctgcagcagactctgttcaacagaggcgtcagtac
aggaggcaaaaccaacagtcttcatctgattctggttcttcatcttcatctgaagaggaa
agacctaaaagatccaatgtgaagaatggggaagttggtagacgccgacgccattcacat
tcacgcagtccatcaccgtctccacgaaaacgacagaaggaatcctcccctcgtaggagg
aggagaagtccatcgcccccaccagccaggcggcgacgctctccttcccctgcccctcct
cctaggcggcggcggtcaccttcattacctcgtcgaaggtctccatcgccacccccacgc
agacgctcaccttctccgcggagatactctccgccgatacagaggcggtattctccttct
ccaccacctaagagaagaacggcttctcctcctcccccgcctaagcgaagggcatcacct
tctccacagtcaaaacgcagagtctcccattcaccaccgccaaaacaaaggagctcgcca
gctgctaaaaggcgttcaccctcgatatcttccaagcacaggaagggatctcctcccagt
aggtccaatcgggaaacacgttctccaccacaaaacaaaaggcattcaccttcaccacgg
cctagagcttctcatacctctgcaagcccgccaccaccacggaggggagcttcagcttca
ccccagagaaggcagtctccatctccaagcactagacccatcaggagggtgtcaagaacg
ccagaacctaagaagacaaaggcctccacgccaagtccacgatctgcaagacgggtgtct
tcatcacggtctgcatcaggatcacctgagccagcaccgaaaaagcatcaaggacctcca
tctcctgctcggtctcgttccccttctgcaaactggtcacctgcaaaaaaggctaaaagc
ccaactcagagcccgtcacctgcaaggaattcagatcaagaagggggtgggaagaagaag
aagaaaaagaaggataagaagcataaaaaggataaaaagcacaagaaacacaaaaaacat
aagaaggagaaggccgcggcggccgcagcagctgctgccctgctgctgtggctgcagcag
ataccacctccgtacaggaagaccaggaagcagagacagaacccaaaaaggagacagaaa
gtgaaccagaagacaaccttgatgatctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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