KEGG   Nelumbo nucifera (sacred lotus): 104586917
Entry
104586917         CDS       T04131                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03030  DNA replication
nnu03410  Base excision repair
nnu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104586917
   03410 Base excision repair
    104586917
   03420 Nucleotide excision repair
    104586917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nnu03032]
    104586917
   03400 DNA repair and recombination proteins [BR:nnu03400]
    104586917
Enzymes [BR:nnu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     104586917
DNA replication proteins [BR:nnu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    104586917
DNA repair and recombination proteins [BR:nnu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      104586917
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 TPD52 zf-DNA_Pol
Other DBs
NCBI-GeneID: 104586917
NCBI-ProteinID: XP_010242612
UniProt: A0A1U7YR54
Position
Un
AA seq 2225 aa
MNNEGRRRDRRDSRSTKKQKLIRSAEEEFESKLGFDLFTEGEKRLGWLLTFASSSWEDED
TNKTYSCVDLYFVSQDGSTFKSKYKFPPYFYAATKDKMELDVEAYLKRRYEGQISDIEIV
EKEDLDLKNHLSGLRKSYLKISFDTVQQLMRVKNDLLHVVERNQAKLEAAEAYESILSGK
GKQRPQDFIDCIIDLREYDVPYHVRFAIDNDVRCGQWYDVSISSTGVTLEKRADLLQRAE
VHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGEDIEDLEYTPKPEF
EGCFKVKNVKNEEELLRQWFAHMQEVKPGIYVTYNGDFFDWPFLESRAVHHGIIMSNELG
FQCDKNQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRL
AMEHPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMV
QAYKAHVICPNKHQTDPEKFYNNHLLESETYIGGHVECLESGVFRSDLPTRFQMDPSSYE
QLIRNLDRDLQYAIRVEGKMEMESVSNYDEVKDAIMEKLVKLRDEPIREECPLIYHLDVA
AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYFHLKR
QLESELVDGIDGQLSKSFLDLPKAEQQSKLKERLKKYCQKAYKRVLDKPVTELREAGICM
RENPFYVDTVRSFRDRRYEYKGLNKVWKGKLAEAKASGNSISIQEAQDMVVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCAL
PGSFPENFTFKTKDSKKKLTISYPCVMLNVDVARNNTNDQYQTLKDPVNKTYTTHSECSI
EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEV
FDKFLHGTTLEECYSAVASVANSWLDLLDSQGTDIADSELLDYISESSTMSKSLADYGEQ
KSCAVTTAKRLADFLGDTMVKDKGLRCQYIVAREPQGTPVSERAIPVAIFETNAEIMKFY
VRKWCKVSSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKV
REKEDKFRQRKIVDVFSSLNKDNTKQTNFSGINSNHVLGEMNMEDLEDFQNKGSASVVGP
RPVVRSYETNRKQHLVKSSSSMISLAQQTDATCRLNQPFMPLHPNTISDTNVDRNADYQG
WLEIKKRKWKYAREERKRRRLGNLRGLDKSDEVSKLSSAVARQKQGSGRNGVSSFFRRHE
VSLVRSYWQIIQLIPSSHPGQFYAWIVVEGIMIKVPINVPRVFYLNSKAPVTEEFPGRRV
NKTLPHGRPSFNLIEVITDEDEFREGSKRLAAHLADPEVEGIYETKVPLEFSAILQIGCV
CKVDRKSMSRDAQSSWGLSELQMKTTTECLYLEQSLSFFYLYHSISEGRAIYVAYFPASG
TTLVVVVNPFQNKELTPSILEKQFREACQSLSIELPLRGNGIVFKVEYVGYVKDAEKLLQ
RAINEYRQQHHGPAIAVIECPNIIAMKSGIRVLDDFPCVNIPCNVRDSHYQALGWQIVAA
KIGMQRCAASSQWLNERISLSRYAHVPMGNFELDWLLYTADIFFSRALHDQQQVLWISND
GIPDLGGIVEEEICFADEVHQLVLIYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGA
LFGFDQEINSGEQIGFDETSLCAPAFRVLKQLIQRCLADAVTSGNVFADAILQHLYRWLC
SPQSKLHDPALHRVLHKVMQKVFALLLAEFRKLGATIVFADFSKIIIDTGKTDLSAARAY
CDCILKTLQTRDLFEWIEFEPLHFWHSLLFMDQYNYGGIQARSPAGGSVNISHPSYDAIE
SESQVEIVSSWNIAEYLPKETQDHFVLIVSEFMYKPWKYAQKQAEISAASMGGDLCTPSI
TIAAAENFESQVTGFLKEQISSYFTDKLLRIVRDTVFHFRGVNKSENDDASHGVPQVVGS
DIHKGDAALEFIKHVCAALALDHNVQHDILVMRKNLLKYVRVREFAPEAEFHDPCVSFTL
PNVICSYCNDCRDLDLCRDSALLAQEWRCSMPQCGQPYDREQMENALLQIVRQRERLYHL
QDLVCLKCNQIKAAHLAEQCACAGSFRCKEDVSEFFSKMQVFLKIAVNQTFKLLEECSLW
TLEVR
NT seq 6678 nt   +upstreamnt  +downstreamnt
atgaacaatgaaggtaggcggagagatcgcagggattcgagaagtaccaagaagcaaaag
ctcattcgcagtgccgaagaagaatttgaatcaaaacttggctttgatctgttcaccgaa
ggcgaaaagaggcttggatggttgctgacttttgcatcttcatcgtgggaggatgaagat
actaacaagacgtatagttgtgtggatctttactttgtttctcaggatggatctactttt
aagtcgaaatacaaatttcctccttacttctacgcagccacaaaggataaaatggaattg
gatgttgaggcatatcttaaacgacgatatgaagggcaaatttctgatatagaaatagta
gaaaaagaggaccttgatctgaaaaaccatttgtcaggcttaagaaagtcttatttgaag
atatcctttgatacagttcaacaattgatgcgtgtgaaaaatgatctactgcatgttgtc
gaaagaaaccaggcaaagcttgaagctgcagaagcatatgaatctatattaagcgggaag
ggcaagcaaagacctcaagattttattgattgtattattgatcttcgcgagtatgacgtt
ccatatcatgttcgttttgccattgacaatgatgtaagatgtgggcagtggtatgatgtt
agcatatcaagtactggagttaccctagagaagagggctgatcttctacaacgtgctgaa
gttcatgtatgtgcatttgatattgagacaacaaaacttccactgaaatttcctgatgcg
gaatatgatctgataatgatgatttcgtacatggttgatggacaaggctatctcataatt
aacagagagtgtgtgggggaggatatagaagatttggagtataccccaaaaccagaattt
gaaggatgtttcaaggtgaaaaatgttaagaatgaggaagaactccttagacaatggttt
gcccatatgcaagaagtgaagcctggtatttatgtgacctacaatggtgatttttttgat
tggccattcttggaaagtagagcagttcatcatggaatcataatgagtaatgagttggga
tttcaatgtgataagaatcaaggggaatgccgtgctaaattttcttgtcatttggattgc
tttgcttgggtcaaacgtgatagttatctacctcaagggagccatggtctaaaggctgtt
acaaaggctaagctgggttatgatcccctggaggtgaatcctgaagatatggttcggctt
gccatggaacatccccagatgatggcttcatattctgtatcagatgccgttgcaacttac
tacttgtacatgacctatgttcatccattcattttttctcttgcaactataatacctatg
ccacctgatgaggtcttgcgtaaagggagtggtaccctttgtgaaatgcttcttatggtt
caggcatacaaggcacatgttatctgcccaaacaagcaccaaactgacccagagaagttc
tacaataatcaccttctagagagtgagacatatataggtggccatgtggaatgccttgaa
agtggggttttcagatctgatcttcccactaggtttcagatggatccatcttcctatgag
caattaatcagaaaccttgatcgtgatctgcaatatgcaataagagtagagggtaagatg
gagatggaatcggtttccaattatgatgaagtgaaggatgctatcatggaaaagcttgtt
aagttgcgagatgaacctatacgtgaggaatgccctcttatatatcatcttgatgttgct
gcaatgtatccaaatataattttaacaaacaggcttcagccaccatcaatagttacagat
gaggtatgcacagcatgtgatttcaatcgtccagggaaaacttgtctccgaaagcttgaa
tgggtttggcgtggagaaacattcatggcaaagaaaagtgactattttcatttgaagagg
caactggagtctgaactagttgatggcatagatggtcagttgtcaaaatcttttcttgac
ctgcccaaggctgagcaacagtcaaaactgaaagagcgcctaaagaagtattgccaaaag
gcctataaaagggtccttgacaagccagttactgaacttcgggaggcaggaatatgcatg
agagaaaatcccttctatgttgacactgttcgcagtttcagagatagaaggtatgagtat
aaaggactaaataaggtttggaagggaaaactagcagaggcaaaagccagtggaaattct
attagcatccaggaagcacaagatatggtagttctatatgattctctacagctagctcat
aaatgtattcttaattcgttctatggatacgtcatgcgcaagggtgcaagatggtactca
atggaaatggctggagtagtcacttatactggggcaaaaataattcagaatgctcgtcta
ctggttgaaaaaattgggagacctctagaattggacacagatggcatctggtgtgcactt
cctggatcttttccagagaatttcaccttcaaaacaaaagactcgaagaagaagctgaca
atatcatacccttgtgttatgcttaatgttgatgtggctagaaacaatacaaatgatcaa
tatcagacactcaaagatcctgtgaataagacatatacaactcacagcgaatgctccatt
gaatttgaggtggatggaccatataaggcaatgattctcccagcttcaaaggaagaaggg
attttaattaagaagcgatatgctgtctttaatgatgatggaaccctggctgaacttaaa
ggatttgaaatcaagagaaggggtgagcttaaacttatcaaggttttccaggctgaagtt
tttgacaagttcctccatgggacaaccttagaggagtgctattcagctgttgcatctgtt
gccaacagctggcttgatcttctcgatagtcaaggtactgatatcgctgatagtgagttg
cttgattacatatcggaatcaagtaccatgagcaagtccttggcagactatggagaacaa
aagtcatgtgctgtgacgactgcaaaacgacttgctgattttcttggtgatacaatggtt
aaagataaagggctacgctgccagtatattgtagctcgtgagccacagggcacaccagta
agtgagcgtgccattcctgttgctatatttgagactaatgctgaaattatgaagttctat
gtgcgcaaatggtgcaaggtttcatcagatgtgggaattcgatcaattattgattggtcc
tattacaagcaacgactcagttcagcaattcaaaaaattataaccatacctgcagcaatg
cagaaggttgctaatcctgtccctagagtagttcatcctgattggctgcataagaaggtc
cgtgagaaggaggacaagtttcgacaaagaaaaatagttgatgtcttcagctcgttgaac
aaggataataccaagcaaacaaatttctctggcattaactccaatcatgtattgggtgag
atgaacatggaggatttggaagacttccaaaacaagggcagtgcttctgtagtcggacct
cgacctgtagttcgtagctatgaaaccaacaggaaacaacatttagtgaaatcatctagt
tcaatgatttctttggcacaacaaactgatgctacttgtagactgaaccaacctttcatg
ccattgcatccaaatactatatcggatacaaatgttgacagaaatgctgattaccaggga
tggcttgaaataaagaagagaaaatggaaatatgctcgagaagaaaggaagaggcgcagg
ttgggcaatctgaggggactagataaatctgatgaagtttctaagttgtctagtgctgtg
gcaaggcagaaacaaggctctggtagaaatggtgtcagttcatttttccgacgacatgaa
gtgtcccttgtgcgttcatactggcagataatacagctcatcccaagttcacacccaggg
caattttatgcttggattgttgtggaaggaatcatgattaaagttcccataaatgtaccc
agagtattttacctcaattccaaagcaccagttacagaagaatttcctggaaggcgtgtt
aataagactcttcctcatggacgtcctagtttcaatcttattgaggtgattactgatgaa
gatgaattcagggaaggaagcaaaagacttgcagctcaccttgctgatccagaagttgag
gggatatatgagacgaaggtgccacttgaatttagcgccatccttcagattggttgtgtc
tgtaaggtggacagaaaatctatgagtcgagatgcacagagtagctggggtctaagtgaa
ctccaaatgaagaccacaacagaatgcctgtatcttgagcaatctctgtccttcttttac
ttataccatagtatctctgagggacgagctatatatgttgcatattttcctgcatctggc
acaacacttgttgtggtggttaatcctttccagaacaaagagttgaccccatctattctt
gaaaagcaattccgtgaagcttgccaatctttgtctattgagctccctttgcgtggaaat
ggcattgttttcaaggtggaatatgttggatacgtcaaagatgcagaaaagcttttgcaa
agagcaataaatgagtacagacaacaacaccatggacctgcaattgctgtcattgaatgt
ccaaacattattgcaatgaagtcaggcatacgcgttctggatgattttccttgtgtaaat
atcccctgcaatgttcgtgatagccactatcaggctcttggttggcagattgtggctgcg
aaaatcggaatgcaacgatgcgctgcttcttcacaatggttgaatgagcgaatatctctt
tcgagatatgcacatgttccgatggggaatttcgaacttgattggctgctttatacagca
gatatcttcttttcaagagctttgcatgatcagcaacaggtgctatggatatccaatgat
ggtattccagacctaggtggcatcgttgaagaagagatttgctttgctgatgaagtccat
caacttgttcttatttatcctggggcatatagaaaagtgactgtggagcttaagattcac
cacctggctgtagatgctcttctgaagagcaaccaggtgaatgaaatggaaggtggtgcc
ttgtttggatttgaccaggaaataaattctggagaacagattggttttgatgaaactagc
ttgtgtgcacctgcattccgtgtcctgaaacagttgattcagaggtgtcttgcagatgca
gttacctctggaaatgtatttgctgatgcaatcttgcaacacctctatcggtggctttgc
agcccacagtcaaaacttcatgacccagctcttcatcgtgtactgcacaaggtcatgcaa
aaggtatttgcattgttgctggctgagtttcggaaattgggggctacaattgtctttgcg
gacttctcaaagattattatagacacaggaaagacagacttgtctgcagccagagcttac
tgtgactgtatattgaaaactctacaaaccagagatctttttgagtggattgaatttgaa
ccactgcacttctggcactcactgctatttatggatcagtataactacggtggcattcag
gccagatcccctgctggaggttctgttaatatttcgcatccttcttatgatgccatagaa
tcagaatctcaagtagaaattgtatcaagctggaatatagctgaatatttaccaaaggag
actcaggatcattttgttttgattgtttctgaatttatgtacaagccatggaaatatgca
caaaaacaagctgaaattagtgctgcttcgatgggtggtgacttgtgcactccatcaatc
accattgcagcagctgagaactttgaatcacaagtgacaggatttcttaaagagcagatc
agctcttactttacggacaagcttcttaggattgttcgtgatactgttttccacttcagg
ggggtgaacaaatctgagaatgatgatgcatctcatggagtacctcaggtggttggttct
gatatacataagggggatgctgcattggagttcattaagcatgtctgtgctgctcttgct
cttgatcataatgttcagcatgatattctggtcatgaggaagaatttgttaaaatatgta
cgtgttagggagtttgctccagaagctgagtttcatgatccctgtgtatcgttcaccttg
ccaaatgttatttgcagctactgcaatgattgcagagatctagatttgtgtcgggattca
gctttgctagcccaggagtggcgatgttccatgccacagtgtgggcagccctatgatcgt
gaacaaatggagaatgctcttctccaaattgtccggcaaagagaacgtctctatcatctt
caggaccttgtttgcctcaagtgcaaccaaattaaagctgcacatctagctgagcagtgt
gcctgtgctggttcattcaggtgcaaggaagatgtgtccgaattctttagtaaaatgcaa
gttttcctgaaaatagctgtcaatcaaacattcaaacttcttgaagaatgtagtctgtgg
accctagaagttcgataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (53)   

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