KEGG   Nelumbo nucifera (sacred lotus): 104587135
Entry
104587135         CDS       T04131                                 
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104587135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104587135
   03016 Transfer RNA biogenesis [BR:nnu03016]
    104587135
Enzymes [BR:nnu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     104587135
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     104587135
Transfer RNA biogenesis [BR:nnu03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    104587135
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 PAP_NTPase TUTase Polbeta Nrap_D2 LPD29 DNA_pol_B_palm
Other DBs
NCBI-GeneID: 104587135
NCBI-ProteinID: XP_010242910
UniProt: A0A1U7YXV5
Position
Un
AA seq 541 aa
MEIDGFVYETLGSLSASTVPSTDFSGPDSPEPYSVFRTQITSSSLNCHSPETAAPDYFSL
DVEDVDADVVDGSRQPTAATPPVATPTSSRPVDRTLEVGWFRANKRFRSPMIQLHKEILD
FCSFLSPTPEEQASRNTAVECVFDVIKYIWPHCKVEVFGSFKTGLYLPTSDIDVVILESK
VKTPQIGLKALSRALSQRGIAKQIQVIAKARVPIIKFVERKSGISFDISFDVENGPKAAE
FIKDAVTKLPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLMAHLQGFQDGRASVE
HNLGVLLVNFFDFYGHKLNTCDVGISCKAGGTFFLKSNKGFFNTNRPFLLSIEDPQAPDN
DIGKNSFNYSQIRSAFAMAFSILTNAKTILNLGPNRSILGTIIRSDPVLLERRGGCNGEV
TFNSLLPGAGEPLQPQFMNEQEILCNWQLDDEDPLPRGNGIFGEDSGSYSSRERKALKER
LRSQVKENGEVVNFRHEENGSRKDKTPKKKRWRNHPDGSNGYGASSTSRRYIGGSPWGRS
C
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggagatcgacggtttcgtatacgaaaccctaggctctctatcagcctcaaccgtccca
tcaaccgacttctccggtcccgactctcccgagccctactctgtattccgaacccagata
acttcttcctcattgaactgccattctcctgaaactgctgcgcctgactacttctctctt
gacgtcgaagacgtcgacgccgacgttgtcgatgggtcgaggcaaccgaccgccgcgact
cctcctgttgccactcctacctcgtctcgaccagtggataggacgttggaggtcggctgg
ttccgagccaacaagcggttcaggagccccatgattcagctccacaaagagatacttgat
ttttgtagctttctgtcaccaaccccagaggagcaagcatcacgaaatactgctgtagag
tgtgtttttgacgtcattaaatatatatggccccactgtaaggttgaagtgtttgggtca
tttaagacaggcctctatcttccaactagtgatatcgatgttgtgattttggagtccaag
gtcaaaactccacaaattggtttaaaagctctttctagggccttatcccagagaggtatt
gctaaacaaatacaggtgatagcaaaggctcgtgtaccaattattaagtttgtggaaagg
aaaagtggcatttcatttgatattagctttgatgtagaaaatggaccaaaagcagcagag
tttattaaggatgctgtaactaagttaccccctttacgaccattgtgtttgatactgaag
gtctttctacagcagagagaactgaatgaggtatattcaggtggaattggttcttatgca
cttcttgcgatgctaatggcacatttgcagggttttcaggatggcagagcttctgtagaa
cacaacttgggagtccttttggtcaacttttttgatttttatggacataaattgaacact
tgtgatgttggcatatcttgcaaagcgggaggcacctttttcttgaagagcaacaaaggg
ttcttcaatacaaatcgaccatttcttctgtccattgaggatccacaggcaccagacaat
gatattggaaagaactccttcaactattctcagatcaggtcagcttttgcaatggctttt
tctatattgactaatgcaaagacaatcttgaacctgggtcccaacaggagcattcttgga
actataataagatctgaccctgtacttctagagcgaagagggggttgtaatggagaggtg
acttttaatagtttgctcccaggggctggggaaccattacagccacaatttatgaatgaa
caggaaatcttatgtaattggcaattggatgacgaagaccctctacctaggggcaatggc
atttttggagaagacagtggttcatattcctctcgggaaaggaaagctctcaaagagagg
ctcagatcccaggtaaaggaaaatggggaagtggtgaatttcaggcatgaagaaaatggg
agtagaaaagacaaaacaccaaagaagaaacgctggagaaatcacccagatggaagtaat
ggctatggtgctagcagtaccagtagaagatacatcggaggatccccatggggtcgaagc
tgttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (41)   

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