KEGG   Nelumbo nucifera (sacred lotus): 104587562
Entry
104587562         CDS       T04131                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03082  ATP-dependent chromatin remodeling
nnu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104587562
   03083 Polycomb repressive complex
    104587562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nnu03036]
    104587562
Enzymes [BR:nnu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104587562
Chromosome and associated proteins [BR:nnu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104587562
   HDAC complexes
    Sin3A-HDAC complex
     104587562
    BRAF-HDAC complex
     104587562
    REST complex
     104587562
    SHIP complex
     104587562
    MiDAC complex
     104587562
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104587562
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104587562
  Chromatin remodeling factors
   NuRD complex
    104587562
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104587562
NCBI-ProteinID: XP_010243527
UniProt: A0A1U7YT92
Position
Un
AA seq 430 aa
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSEDYIEFLHRITPETQHLFTNELEKYNLGDDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCGASGFCYMNDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDKFFPGTGDVKEIGEREGKYYAINVPLKDGIDDSSFTRLFKT
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIDGHSECVRFVKKFNLPLLVTGGGGY
TKENVARCWAVETGALLDTELPNEIPDNEYIKYFAPDYSLKIPNGNLENLNSKSYLGTIK
MQVFENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKQIQRDDEYYEGD
NDNDQSMDDA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgctcgaaggaccggatatcttacttctacgatggagatgtgggcagtgtttatttt
ggcccaaatcatccgatgaagccacatcgtctttgtatgacacaccatcttgtcctctca
tatgagctccacaagaagatggaaatatatcggcctcacaaggcataccctgtcgagctt
gctcagttccattcagaagattacattgagttcttgcaccggataactcctgaaactcaa
catctgttcaccaatgaactggaaaaatataatcttggagatgattgcccagtttttgac
aacttgtttgagttctgtcaaatttatgcaggaggaacaatagatgctgcacgcagattg
aataatcaactttgtgacattgccataaactgggctggtggtctacaccatgcaaagaag
tgtggagcatctggtttttgttacatgaatgacttagtcttgggtattctggaacttctt
aaatatcatgcacgggttctatatattgatattgatgtgcatcatggtgatggagttgaa
gaagcattctatttcactgacagggtgatgactgttagttttcacaaatatggggacaaa
ttctttcctggaacaggtgatgttaaggaaataggagaaagagaaggaaagtactatgct
ataaatgtcccactgaaggatggaatagatgattcaagcttcactcgactctttaaaaca
attattgccaaggttgttgaaacatatctaccaggtgttattgttcttcaatgtggagct
gattcacttgctggagaccgcttaggctgcttcaatctctccattgatgggcattctgaa
tgtgtaaggttcgttaagaaatttaatttgcctttattggttactggaggtggagggtac
acaaaagagaatgtggctcgttgctgggctgttgaaactggtgctcttttagatacagag
cttcctaatgaaataccggataatgagtatatcaaatatttcgccccagactattcattg
aagattccaaatggcaacctagaaaatttaaatagcaaatcttatcttggcacaatcaaa
atgcaagtctttgaaaatcttcgttgcatccaacatgctccaagtgtacaaatgcaagag
gttccacctgatttctatatcccagattttgatgaagatgagcagaacccagatgaacga
gtggatcagcacacacaagacaagcaaatccagcgagatgatgaatattatgaaggtgac
aatgacaatgatcaaagcatggatgatgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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