KEGG   Nelumbo nucifera (sacred lotus): 104599466
Entry
104599466         CDS       T04131                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03013  Nucleocytoplasmic transport
nnu03015  mRNA surveillance pathway
nnu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104599466
  09122 Translation
   03013 Nucleocytoplasmic transport
    104599466
   03015 mRNA surveillance pathway
    104599466
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104599466
   03041 Spliceosome [BR:nnu03041]
    104599466
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     104599466
Spliceosome [BR:nnu03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    104599466
SSDB
Motif
Pfam: RRM_1 DUF5721
Other DBs
NCBI-GeneID: 104599466
NCBI-ProteinID: XP_010260317
UniProt: A0A1U8A279
Position
Un
AA seq 252 aa
MALLFKDPSKLSAYRDRRFPGSQEEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVIYYSRGDAEDTVKYVSGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDYGAGSLGAFPPVMPSHYARHG
GQGHGGSHRHGRDYHRKRYREDDRHASDVSKRSSDHESRRASDHESRPEKNPRFRESGDS
DDEDEDDRKRRP
NT seq 759 nt   +upstreamnt  +downstreamnt
atggcattgttatttaaggatcccagcaagctttcagcatatcgggatagaagatttcct
ggttcacaagaagaatttgaacatgcgctacagacttctacaactgtttatgttgggaat
atgtccttctacacaacggaagagcaagtttatgaattattttctcgagctggagagatc
aaaaaaataatcatgggtttggataagaacaccaaaaccccatgtggtttttgctttgtc
atatactactctaggggtgatgctgaggataccgttaaatacgtaagcgggacaattctt
gatgatcgtccaattcgtgttgattttgactggggattccaagaaggaaggcaatggggt
cgtggtcgaagtggtggacaggtgcgagatgaatatcgtactgattatgatcctggtaga
ggtggttatggaaaattggtccagagagaactggaagcacagaggcagctagtagattat
ggtgcaggttctttgggtgctttcccacctgttatgccatctcattatgctagacatggt
ggtcaggggcatgggggttcccatagacatggtagagattaccatcgcaagcgctaccgg
gaagatgatcgccatgcatcagatgtctcaaaaagaagttctgatcatgaatcccggcga
gcctctgatcatgagtccaggccggaaaagaacccacgttttcgggagagtggggattct
gatgatgaggatgaagatgaccgaaagagaaggccttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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