KEGG   Nelumbo nucifera (sacred lotus): 104606243
Entry
104606243         CDS       T04131                                 
Name
(RefSeq) THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104606243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104606243
   03041 Spliceosome [BR:nnu03041]
    104606243
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104606243
Spliceosome [BR:nnu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104606243
SSDB
Motif
Pfam: FmiP_Thoc5 RWD
Other DBs
NCBI-GeneID: 104606243
NCBI-ProteinID: XP_010269644
UniProt: A0A1U8B1A0
Position
Un
AA seq 814 aa
MELEMEDSISSPVRRTEKAAYEQLEEIRTSMEDIVAKMLFIKKEGRPKAELRELVTQMSL
HLVNLRQVNRSILLEEDRVKAETERAKAPVDFTTLQLHNLMYEKXHFVKAIKVCKDFKSK
YPDIELVPEEEFFSSAPQDIKGSVLSKDSAHDLMLKRLNFELFQRKELCKLHEKLEQHKK
SLMETIANRKKFLSSLPSHLKSLKKASLPVQHQLGVLHTKKLKQHILAELLPPPLYVIYS
QLLAQKEAFGESIELEIIGSMKDAQAFAHQQAIKDNGVSTNTEMNKLEDDVPDEEEDGQR
RRKRPKKVTGKENLDQSGIYQSHPLKIILHIHDDEVSNPKPTKLVTLRFGYLLKLNVVCV
GIDGSQEGPQNNILCNLFPDDTGTELPHQSAKLFVGDAAGFDERRTLRPYKWAQHLAGID
FLPEVSPLLTGCETQSSEMGKSSAVISGLALYRQQNRVQTVVQRIRLRKKAQMALAEQLD
SLMKLKWPALICEHVPWASHTPLCNLQSWSSIGPSSNQVSSLSGNAMGQIPDPLDLDVDG
RSGVSREEIESAREDGELPSVAQVSTPINDANLLDSKPLPAKSSDLEHSRDLALISKSSV
APINKLKSQSFKKHDEDLDILLDTESDMEEVALTELENENATSIGCSKVIDKSWEDYGSM
EFCLVLSRKMDKSQRNVKLEAKVKISMEYPLRPPVFTVKLYTIMPGESHERNASEWYNEL
RAIEAEINLHVVKILPVDYENYILAHQVCCLAMLFDFYMDEASPFSEMRKSTSVVDVGLC
TPTTGRILARSFRGRDRRKMISWKDMECTPGYPC
NT seq 2445 nt   +upstreamnt  +downstreamnt
atggagttggagatggaggattcgatatcgtcaccggtgcgcaggacagagaaggcggcg
tacgaacagttggaagagatccgaacttcaatggaggacatcgttgcgaaaatgctcttc
ataaagaaggaagggagacccaaagccgaactaagagagctcgtcactcagatgtctctc
cacctggtcaacctccgtcaggtaaatcgttctatattgctagaagaggatcgtgttaaa
gcagaaacagaacgtgctaaggcaccagtagatttcactacattgcagcttcacaatttg
atgtatgagaaaawtcattttgtgaaagccataaaggtgtgcaaagatttcaagtcaaag
tatccggatattgaacttgtgcctgaggaagagtttttcagttcagcccctcaagatatt
aaaggatctgtactatcaaaagacagtgcacatgacctgatgctaaagcggcttaatttt
gagcttttccagcgaaaagaactctgcaaacttcatgagaaactggagcaacacaagaaa
agccttatggagaccattgcaaaccgaaagaagttcctttcaagtctcccttcacacctg
aaatctctgaagaaagcatccttgcctgtccaacaccaactgggggttctgcatacaaag
aaattaaaacagcatattttagcagaattactgccacctccactctatgtgatttattca
caattgctggctcagaaggaggcatttggggagagtattgaattggaaattataggaagc
atgaaggatgctcaagcctttgcccaccagcaagcaattaaggacaatggtgtttctaca
aatacagaaatgaataagttggaggatgatgtgcctgacgaggaagaggatggccaaaga
aggagaaaacggccaaagaaggttactggaaaagagaaccttgaccaatcaggaatctat
caatctcatcctcttaaaatcatccttcatatacatgatgatgaggtttcaaatcccaag
cctacaaaactggttactctgaggtttggatacttattgaagttgaatgttgtatgtgtt
ggrattgatggctctcaagaaggacctcagaacaacatcttatgcaacttgtttcctgat
gatactggtactgagcttccccatcagtcagctaagctctttgttggtgatgctgctgga
tttgacgaaaggagaaccttacgtccatataagtgggcccaacatttggcaggaattgat
tttctacctgaggtgtctcctttgcttacgggctgtgaaactcaaagcagtgaaatgggc
aaaagttctgcggttatttctggccttgctctttatcgtcagcagaatcgggtacaaaca
gttgtgcaaagaatccgcttgcggaaaaaggctcagatggctcttgcggagcagcttgat
tccttaatgaagcttaaatggcctgcattgatttgtgaacatgttccatgggcctcgcat
acccctttgtgcaatttgcagagttggtcatctataggaccctcatctaatcaggtttca
tctttgtctggcaatgccatgggacaaattcctgaccctttagaccttgatgtggatggg
agatctggtgtgtcaagggaagagatagagagtgctagggaagatggggaacttccatct
gttgctcaggtttcaactcccataaatgatgctaatctccttgattctaaacccctccca
gcaaaatcatctgatcttgaacattctagagacctggctttaatttcaaagagctcagtt
gctcctatcaacaagttaaaatctcaaagtttcaagaaacatgatgaggatttagatatt
ctactggatactgagagtgatatggaagaagttgcattaactgagctagagaatgaaaat
gccacaagtattggatgctctaaggtgattgacaagtcatgggaggactatgggtccatg
gagttttgcttggttctgagtaggaaaatggataagagtcagcgaaatgtgaagttggaa
gcaaaggtgaagatcagcatggaatatcctctcaggcctccggttttcactgtcaagttg
tataccatcatgccaggagaaagtcatgagaggaatgcttctgaatggtataatgaactc
cgtgccatagaagcagagatcaatcttcatgtcgtaaagattctgccagtggattacgag
aattacatcttagctcaccaagtatgctgtcttgcaatgctattcgacttctacatggat
gaggcgtccccattttctgaaatgagaaagagtacttctgtggtagatgttggtttgtgc
accccaactactggaagaatacttgcaagatctttcaggggaagagatcggaggaagatg
atctcttggaaggatatggagtgcacacccggatatccttgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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