KEGG   Nelumbo nucifera (sacred lotus): 104612902
Entry
104612902         CDS       T04131                                 
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    104612902
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:nnu01007]
    104612902
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nnu03016]
    104612902
Enzymes [BR:nnu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     104612902
Amino acid related enzymes [BR:nnu01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   104612902
Transfer RNA biogenesis [BR:nnu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    104612902
 Prokaryotic type
    104612902
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N Exo70_C ArnB_C TolA_bind_tri DUF1192 FapA CLZ
Other DBs
NCBI-GeneID: 104612902
NCBI-ProteinID: XP_010278855
UniProt: A0A1U8BBZ7
Position
Un
AA seq 521 aa
MGLPCGFGASTLQTLKLVAIPSSFSMLRPCISKTLSLHSYHHFQRSSLPFLSRALSATAL
QSTSIANEDEKGISFSPLVKPQWRAAIDFKWIRDNKDSVAANIKNRNSNADLELVLELYE
RLSNLQKEVERLRGERNVVANKMKGKLERSERQRLIEEGKNLKEGLAALEEDLVELTDKL
QQEAQSIPNMTHPDVPIGGEDCSVLRRMVGSPREFSFPVKDHLQLGKGLDLFDFDAAAEV
SGSKFYYLKNEAVMLEMALINWTLSEVTKRGYTPLTTPEIVRSSVIEKCGFQPRGANTQV
YSIEGSDQCLIGTAEIPVGGIHMDSILASSTLPLKYVAYSHCFRTEAGAAGTATRGLYRV
HQFSKVEMFILCRPEDSDTYHEELIGIEEDLFSSLGLHFRTLDMASGDLGAPAYRKFDVE
AWMPGLERYGEISSASNCTDYQSRRLGIRFRPSSEISTGPKKGKTNIPTQFVHTLNATAC
AVPRMVICLLENFQKEDGSVIIPEPLIPFMGGLDLIRPKSK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgggtttgccgtgtggttttggagcgtcaactctccaaaccctgaaacttgtagctatt
ccatcttctttctccatgctcagaccctgtatctccaaaaccctttccctacattcctat
catcactttcagaggtcttcacttcctttcctctcaagagctctttcagccacagcactt
cagtctacatccattgccaacgaagacgaaaagggtatctctttctctccacttgttaag
cctcagtggagagctgcaatagacttcaaatggattcgtgacaacaaagactctgtcgct
gccaatattaagaacaggaactccaatgctgatttggagctagtgcttgagctctatgag
agattgtcaaatctccagaaggaagttgaacggcttcgtggggaaagaaatgtggttgca
aacaagatgaaaggaaaactagaacgatctgaacgccaaaggcttatagaagaaggaaag
aatcttaaggaaggacttgcagctctagaagaagaccttgtcgagctcactgataagctt
caacaagaagcacaaagcataccaaatatgactcatccagatgttcctattggaggggag
gattgctcagtactcagaaggatggttggtagtccacgtgagttcagcttccctgtcaaa
gatcacctgcaacttggaaaaggactagatctctttgattttgatgcagctgcagaggta
agtggatcaaaattctactacctaaaaaatgaggcagttatgctagagatggcacttatc
aattggactctatcagaagttacaaaaaggggttatacacctctaaccacccctgagatt
gttaggtcgtctgtcattgagaaatgtggtttccaacctcgtggagcaaacactcaggtt
tattccattgagggtagtgatcaatgcctcattgggactgcagagattcctgtaggggga
attcatatggattccattctagctagttcaacgttgcctttgaagtacgttgcttactcc
cattgcttccgtactgaggctggtgctgcaggcactgcaacaaggggcctttatcgagtc
catcagttcagcaaggtggaaatgttcattttgtgccgaccagaggatagtgatacctac
catgaggagttaattggaattgaggaagatctcttttcatctctagggcttcatttcaga
actttggatatggcatctggtgacttgggtgcacctgcttaccgtaaatttgatgtagaa
gcatggatgccgggtctagaacgttatggtgagatatcaagtgcttcaaattgtactgac
tatcaaagcaggcggttgggcatccggttccgcccttcatctgaaatatcaactggtcct
aaaaagggaaaaaccaacattccaacacagtttgtgcacacccttaatgcaacagcatgt
gcagtccctaggatggtcatctgtctgttagagaatttccagaaagaagatggatctgtt
attattcctgagccattaataccattcatgggtgggcttgatctgattagacctaagtca
aaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (51)   

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