KEGG T04759: BKM31

Actinomadura parvosata subsp. kistnae: BKM31_28630

Entry

BKM31_28630       CDS       T04759

Name

(GenBank) endonuclease IV

K01151

deoxyribonuclease IV [EC:3.1.21.2]

Organism

noa Actinomadura parvosata subsp. kistnae

Pathway

noa03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:noa00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BKM31_28630
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:noa03400]
    BKM31_28630
Enzymes [BR:noa01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     BKM31_28630
DNA repair and recombination proteins [BR:noa03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BKM31_28630

SSDB

Motif

Pfam:

AP_endonuc_2 DUF6307

Other DBs

NCBI-ProteinID:

AQZ64885

UniProt:

A0A1V0A3T6

Position

6406586..6407425

AA seq 279 aa
MTPTSLIGGHVSVTGGLATGGLKYMAEIGAEMIQVFVTNPRGWALNDGKPDEDAKLAESG
VTAFIHVPYLVNFGSPSPETLASSVGVVRHALRRGVETGAKGVVVHTGSAVTQPRDDALR
QLHEHLLPLLDEIPDGGPDLLLEPMAGQGAMLCATVQDIEPYLAALDWHPRACICLDTCH
AFAAGHDLAAEGGVKETFDALHAIAPGRLKLIHANDSKDVCGAKKDRHENIGSGHIGAQP
FAELMRHPAVAGVPICIETPGKAPKHAEDIALLKKLRDG

NT seq 840 nt +upstreamnt +downstreamnt
atgaccccaacttccctgatcggcggacacgtgtccgtcacgggcggcctggcgacgggc
ggcctcaagtacatggccgagatcggcgccgagatgatccaggtgttcgtcaccaacccg
cgcggctgggcgctcaacgacggcaagcccgacgaggacgccaagctggccgagtcgggg
gtgaccgcgttcatccacgtgccctacctggtcaacttcggctcgcccagccccgagacg
ctggccagctccgtcggggtggtgcggcacgcgctgcgccgcggggtggagaccggcgcc
aagggcgtggtggtgcacaccggctcggcggtgacgcagccgcgcgacgacgcgctgcgc
cagttgcacgagcacctgctgccgctgctcgacgagatccccgacggcggccccgacctg
ctgctggagccgatggcgggccagggcgccatgctgtgcgccaccgtccaggacatcgag
ccctacctggccgcgctcgactggcatccgcgggcgtgcatctgcctcgacacgtgccac
gccttcgccgccggtcacgacctggccgccgagggcggggtgaaggagacgttcgacgcg
ctgcacgcgatcgcgccggggcggctcaagctgatccacgccaacgactccaaggacgtg
tgcggcgcgaagaaggaccgccacgagaacatcgggtcgggccacatcggcgcgcagccg
ttcgcggagctgatgcggcacccggcggtggccggggtgccgatctgcatcgagacgccg
ggcaaggcgcccaagcacgccgaggacatcgcgctgctgaagaagctcagggacggctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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