KEGG   Actinomadura parvosata subsp. kistnae: BKM31_54365
Entry
BKM31_54365       CDS       T04759                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
noa  Actinomadura parvosata subsp. kistnae
Brite
KEGG Orthology (KO) [BR:noa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:noa03032]
    BKM31_54365
   03400 DNA repair and recombination proteins [BR:noa03400]
    BKM31_54365
Enzymes [BR:noa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BKM31_54365
DNA replication proteins [BR:noa03032]
 Prokaryotic type
  DNA Topoisomerases
   BKM31_54365
DNA repair and recombination proteins [BR:noa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BKM31_54365
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AQZ69268
UniProt: A0A1V0AGD4
Position
12066591..12067586
AA seq 331 aa
MHPSDQSEPGIVRRRRGRGFSYEGPDGRPVRDPATLARIRALAIPPAWRDVWICTSPRGH
LQAVGTDSAGRRQYRYHDLWREQQDRAKFDRVLEVAERLPAFRKTVDEQLQGRGLTRERV
LAAAARLLDIGFFRIGGESYDTYGLATLRMEHITCSRGVVTCSYQAKGDIRREVEVADPA
ACKVLRSLKALGVEGELLRYRREGGWGDIRSEDINEYLRETIGYEVTAKDFRTWHATVLA
AVGLAVSRPAREGVTSKKRAITRVMREVAEYLGNTPTVARASYVDPRVVEAYDQDRTIAG
ALTELGADADFGQLATAGPVERAVIELIRAV
NT seq 996 nt   +upstreamnt  +downstreamnt
ttgcaccccagcgaccagagcgagccgggcatcgtgcgacgccggcgcgggcgcgggttc
agctacgagggccccgacggccggccggtgcgcgatcccgccacactcgcccgcatcagg
gcgctggccatcccccctgcctggcgggacgtgtggatctgcacgtcgccgcgcgggcat
ctgcaggccgtcggcacggactccgccggccgcaggcagtaccgctaccacgacctgtgg
cgcgagcagcaggaccgggccaagttcgaccgggtgctggaggtggcggagcggctgccg
gcgttcaggaagaccgtggacgagcagctccaggggcgcgggctgaccagggagcgggtg
ctggccgcggcggcccggctgctcgacatcggcttcttccgcatcggcggcgagagctac
gacacctacggcctggccacgctcaggatggagcacatcacctgctcgcgcggcgtggtc
acctgctcctaccaggccaagggcgacatcaggcgggaggtcgaggtggccgacccggcc
gcgtgcaaggtgctgcgctcgctgaaggccttgggcgtggagggcgagctgctgcgttac
cggcgcgagggcggctggggcgacatcaggagcgaggacatcaacgagtacctgcgcgag
accatcggctacgaggtcacggccaaggacttccgcacctggcacgccaccgtgctggcg
gcggtggggctggcggtgtccaggcccgcgcgggagggcgtcaccagcaagaagcgggct
atcacccgggtgatgcgggaggtcgcggagtatctgggcaacactccgacggtggcgcgg
gcgtcgtacgtggatccgcgcgtggtggaggcgtacgaccaggacaggacgatcgcgggg
gcgctgacggagctcggggcggacgcggatttcgggcagctcgccacggcgggacccgtc
gaacgggcggtcattgagctgattcgcgccgtttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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