KEGG   Nonlabens sp. MB-3u-79: CW736_05865
Entry
CW736_05865       CDS       T05253                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
nob  Nonlabens sp. MB-3u-79
Pathway
nob02020  Two-component system
nob02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:nob00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CW736_05865 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CW736_05865 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nob03021]
    CW736_05865 (rpoN)
Transcription machinery [BR:nob03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CW736_05865 (rpoN)
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_12 Dam MarR LacI
Other DBs
NCBI-ProteinID: AUC78954
UniProt: A0A2K8X7Q3
Position
1329791..1331251
AA seq 486 aa
MLKQSLNFKLSQKLSPQQIQLMKLIQLPTQAFEQRVKSELEENPALDDGQEKSDDEYDEF
SNEEDYEDGNESIETDDINVDDYLSDDDIPEYRTKANNYSADDDEKSIPYAAGKSFTQTL
LEQLNTRRLSEDHRAIAEFLVGSIDASGYIRRSLEDITDDLAFTMNLYTEVEEVEKVLRV
VHELDPVGVGARDLQECLLLQLSRKRKTESNEIAIKLIRDSFDAFSKKHYAKIMAKYDIT
EDELRDAIDDIEHLNPKPGGSYAGGSSRVVEQVVPDFTIRIKDGELELTLNGRNAPELHV
SRDYSNMLRGYKEAKEKTKSQKDAVMFIKQKLDGAKWFIDAIKQRQETLFVTMSTIMHYQ
QAYFHSGDERNLRPMILKDIADKIDMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMTNT
DGEEVSTREIKKILETVINDESKKKPLTDQKLAELLKEKGYPIARRTVAKYREQLDIPVA
RLRKEI
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgcttaaacagtcactaaattttaaactctctcagaagttatctcctcaacaaatacag
ttgatgaagttgatacaattgcctacacaggcttttgagcaacgagtaaaatcagaactg
gaagaaaacccagccctagatgatggacaggaaaaatctgatgatgagtatgatgagttt
tctaatgaagaagactacgaggacggaaatgagtctattgaaacagacgatattaatgta
gatgattacctgagtgatgacgacattcctgaataccgcacaaaagcaaataattacagc
gcagatgacgatgagaaaagcattccatatgctgctggaaagtccttcacgcaaacctta
ttagagcaactcaacacccgtagattaagtgaagatcatcgagcgattgcagagtttctt
gtggggagtattgatgcgagtggttatataagaagatcgctggaagatataactgatgac
cttgcttttaccatgaacttgtatacagaagtggaagaggtggaaaaagtacttcgggta
gttcatgaattagatcctgtcggggtaggagctcgtgatttgcaagagtgtttgctgtta
cagctttcgcgaaagcggaaaacagaaagtaatgagatcgccataaaattaataagagat
tcgtttgatgcatttagtaagaagcattatgcgaaaatcatggccaaatacgatattacc
gaagatgaattacgcgatgcgatagatgatatagagcatttaaaccccaagcctgggggt
tcttatgcaggcggaagttctcgtgtggtagaacaagtagttcctgatttcactattaga
attaaagatggcgaattggaactcacactcaacggccgtaatgcgccagagttgcatgta
tctagagattattctaatatgttgcgcggttataaagaggctaaagaaaaaaccaaatct
caaaaagatgcggtgatgtttatcaaacaaaaattagatggtgctaaatggtttattgac
gctatcaagcaacgacaagaaactttatttgtgaccatgtctaccattatgcattatcag
caggcttattttcattctggagatgagcgtaatttaagacctatgatcttaaaggatatt
gcagataagattgatatggatgtttctacggtttctcgtgtggcaaattctaaatatgtc
gacaccccttatggaactaaattaatcaaagaattcttttcagaatccatgaccaatacc
gatggtgaggaggtttccactagagagattaagaagattctggagactgttattaatgat
gaaagcaagaaaaagccgcttacagatcaaaaactagctgaacttcttaaggaaaagggc
tatcctatcgctcgtagaacagttgctaagtacagagagcaattagatattccggtggca
cgtttaagaaaagagatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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