KEGG   Nitrosococcus oceani: Noc_1018
Entry
Noc_1018          CDS       T00281                                 
Name
(GenBank) Pseudouridylate synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
noc  Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:noc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:noc03016]
    Noc_1018
Enzymes [BR:noc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Noc_1018
Transfer RNA biogenesis [BR:noc03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Noc_1018
 Prokaryotic type
    Noc_1018
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ABA57526
UniProt: Q3JCC0
Position
1129157..1129936
AA seq 259 aa
MRIALGLEYDGSNFSGWQSQKGVRTVQATLEQALSAVANEPVTVITAGRTDAGVHAAAQV
VHFDTATFRLEHNWVFGGNANLLPEVAILWAQPVNEAFHARFSAIARHYRYIILNRGARP
AIANRRVTWYCQPLSVTKMKEAGAFLVGEHDFSSFRAKACQAKSPVRNVHYLEVTRQGDW
IVIDISANAFLHHMVRNIAGVLMAIGKGEQPPRWAEEVLQARCRAVGGVTARPDGLYLVR
VDYPDHFDLPRLSRPVTVW
NT seq 780 nt   +upstreamnt  +downstreamnt
atgagaatagcgcttggtcttgagtatgatggttccaatttttctggctggcagtcccaa
aaaggcgtgcgtacagtccaagctactctggagcaggccctttccgcagtggctaacgag
ccggttactgtcatcactgcggggcgtaccgatgcaggagtgcatgccgcggcccaggtg
gttcattttgacaccgccacttttcgtttagagcacaattgggtttttggcggcaatgcc
aatctgctgccggaggtggccattttatgggcacaaccggtgaacgaagcttttcatgcc
cggttttcggcgatagcgcggcactatcgatatatcattctgaaccgcggggcgcggcca
gctatcgcgaatcgccgcgtgacgtggtattgtcagcctttatccgttactaaaatgaag
gaagcaggtgcttttctggtgggcgaacatgatttttcttcctttcgagctaaggcttgc
caggctaagagccctgtcagaaatgtccattatttagaggtgacacggcaaggggattgg
atcgtcatcgatatctcggccaatgcttttttgcaccatatggtacgtaatatcgctggg
gtacttatggcgatagggaagggagaacaaccgccgcgctgggcggaagaggtattacag
gctcgatgccgtgctgtgggaggtgttactgcgcgtcccgatggtttgtatttggtgaga
gtggactatccagatcactttgatttacccagactttcccgtcccgtcacggtttggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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