KEGG   Nostoc sp. CENA543: CLI64_06440
Entry
CLI64_06440       CDS       T05285                                 
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
noe  Nostoc sp. CENA543
Brite
KEGG Orthology (KO) [BR:noe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:noe03021]
    CLI64_06440
Transcription machinery [BR:noe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CLI64_06440
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 CM_1
Other DBs
NCBI-ProteinID: AUT00046
UniProt: A0A2I8A3V7
Position
complement(1539954..1540937)
AA seq 327 aa
MPTVNTHNEDLNAKFTADMVRTYLREIGRVPLLTREQEIVYGKQVQQMMSLLDAKDALAK
KLEREPSLPEWADHVRKSETDVKQTVAQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPMRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKI
KKVQRELAQTLGRSPSPAEIAKELELEPAQIREYLNMARQPVSLDVRVGDNQDTELQEML
EDEGPSPEYYTTQEFLRQDLNTLLAELTPQQREVLALRFGLEDGNEMSLAKVGERLNLSR
ERVRQLEHQALAHLRRRRANVKEYVAS
NT seq 984 nt   +upstreamnt  +downstreamnt
atgcctactgttaacacccacaacgaagacctgaacgccaaattcacggctgatatggtg
cgaacctatctgcgagaaattggcagagttcccttgcttacccgtgagcaggagattgtt
tacgggaagcaggtgcaacaaatgatgtcacttctagatgctaaagatgctttagcgaag
aagttagagcgcgaacctagtttaccagagtgggcagatcatgtccgcaagtcggaaacc
gacgttaaacagacggtagctcaaggtaagcgcgccaagcaaaagatgattgaagcgaac
ttacgcttagtagtggcgatcgccaaaaaataccaaaaacgcaatatggagtttttggat
ctaatccaagagggaactttaggattagaaagaggcgtagagaaatttgaccctatgcgg
ggttataaattctccacctacgcttactggtggattcgccaagcaattacccgtgcgatc
gctcaacaagggcgcaccatccgcctacctatccatattaccgagaaactgaacaaaatt
aaaaaagtccaacgcgaactagctcagactttagggcgatcgccttctccagccgaaatc
gccaaagaactagaactagaacctgctcagattcgtgagtatctgaacatggcgcgccaa
ccagtttctttggatgtgcgagtaggtgacaaccaagatacagaactccaagaaatgctc
gaagatgaaggcccatctccagagtattacactactcaagagttcctccgccaagactta
aacaccttgttagcggaactcacaccccaacaaagagaagtgttagcactccgctttggt
ttagaggatggtaacgaaatgtctctagcaaaagtcggtgaacgcttaaacctcagccgt
gaacgcgtccgccaactagaacaccaagccttagctcatctccgtcgtcgtcgagctaat
gtcaaagagtacgttgctagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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