KEGG   Nostoc sp. CENA543: CLI64_26620
Entry
CLI64_26620       CDS       T05285                                 
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
noe  Nostoc sp. CENA543
Pathway
noe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:noe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CLI64_26620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:noe03021]
    CLI64_26620
   03400 DNA repair and recombination proteins [BR:noe03400]
    CLI64_26620
Enzymes [BR:noe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CLI64_26620
Transcription machinery [BR:noe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CLI64_26620
DNA repair and recombination proteins [BR:noe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CLI64_26620
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 Cas9-BH
Other DBs
NCBI-ProteinID: AUT03677
UniProt: A0A2I8AE68
Position
6370424..6372301
AA seq 625 aa
MRPAQTNQFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKG
IPSYISILLDMPLRDVEQIVYFNSYVVLSPGNAETLSYKQLLSEDQWLEIEDQIYSEDSQ
LQGVEVGIGAEALLRLLADINLEQEAENLREEIGSAKGQKRAKLIKRLRVIDNFIATGSK
PEWMVMTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRSDPSVWDVLE
EVIEGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGRPIITPSQDMVLGAYYLTAENPDATKGAGRFFGSLDD
VIMAFQQEQIDLHAYIYVRFDGEMETEQPDTEPQEVVNNEDGSRTVMYKFRRVREDAQGN
LISQYIRTTPGRVIYNKAIQEALAS
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgagaccagcccaaactaatcagtttgactacgtaaaaatcggcttggcatcaccagaa
cggattcgccaatggggtgaaagaaccttacccaatggtcaagtagttggtgaagtcacc
aaaccagaaacaattaactatcggactctcaagccagagatggacggcttattttgtgag
cgcatctttgggccggcaaaagattgggaatgtcactgtggtaaatacaagagagtccgc
cacagaggtattgtttgtgaacgttgcggtgtagaagtcaccgaatcacgagtacgccgt
catcggatggggtacatcaaactggcagcccctgtagcccacgtttggtatctcaaaggg
attcctagttatatttccatcctgctcgatatgcccttgcgggatgtggagcaaattgtc
tatttcaactcctatgtggttctcagccctggtaacgcggagaccttaagctataaacaa
ctactgagcgaagaccagtggttagaaatcgaagaccaaatttatagcgaagactctcag
ttacaaggcgttgaggtaggtattggtgcagaggcactgttgcgcctgttagctgacatt
aatctagagcaagaagccgaaaatctccgtgaagaaatcggctctgcgaaagggcaaaaa
cgggcaaaactgattaaacgcctgcgggtaattgacaacttcatcgctactggttccaaa
ccagagtggatggtgatgacagtgattcccgtcatccctccagatttgcgcccaatggtg
caactggatggtggacgctttgcaaccagcgacttaaatgatttatatcgtcgggtaatt
aaccgaaataatcgtttagcaagactgcaagaaattctggcaccagaaattatcgtccgc
aacgaaaagcggatgctacaagaagcagtagacgctttaattgacaacggtcgtcgggga
cgtaccgtagttggtgccaataaccgacccctgaaatctttgtctgacattattgagggt
aaacaaggacgtttccggcaaaacttgctgggtaaacgtgttgactactctggacgttcg
gtaattgtggtggggccaaagctgaagattcaccagtgcggtttgcccagagaaatggca
attgagttattccaaccctttgtcattaatcgtttgattcgtagcggcatggtgaacaac
atcaaagctgcgaaaaaactcatctcccgttctgaccccagtgtttgggatgttttagaa
gaggtgatcgaaggccaccccgtcatgctcaaccgtgcgccgaccctacaccgcttgggt
attcaggcgtttgagccaattttggtagaaggtcgagccattcaactacacccgctagtt
tgtcccgcctttaacgctgactttgacggcgaccaaatggcggtacacgtacccctatcc
ctggaaagccaagcagaagcacggttattgatgttggcttctaacaacatcttgtcacca
gcaacgggtagaccaattatcactcctagccaagacatggtgttaggagcatattacctg
acggcggaaaaccccgatgctaccaaaggcgcaggtagattcttcggttctctggatgat
gtgatcatggccttccagcaagaacaaattgacctgcacgcctacatatacgtgcggttt
gatggtgaaatggaaaccgaacaaccagacaccgaaccccaggaagtggtaaataacgaa
gacggtagccggactgtcatgtacaagttccgccgtgtccgagaagatgcccagggcaac
ttaatttctcagtatatacgcacaacccctggtcgcgttatttacaataaggcgattcaa
gaagcacttgctagttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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