KEGG   Nocardioides jishulii: FCL41_05085
Entry
FCL41_05085       CDS       T06163                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
noi  Nocardioides jishulii
Pathway
noi03030  DNA replication
noi03430  Mismatch repair
noi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:noi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FCL41_05085
   03430 Mismatch repair
    FCL41_05085
   03440 Homologous recombination
    FCL41_05085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:noi03032]
    FCL41_05085
   03400 DNA repair and recombination proteins [BR:noi03400]
    FCL41_05085
Enzymes [BR:noi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FCL41_05085
DNA replication proteins [BR:noi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FCL41_05085
DNA repair and recombination proteins [BR:noi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FCL41_05085
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QCX26972
Position
complement(1073629..1074465)
AA seq 278 aa
MAINRSFANRLRTGSRGRTFLSTDRREDVMTGYTVLDLETTGLFPQQHDRVIEIGIVSVS
DEGEVLEEWSTLVNPGRDVGPTDLHGISARDVLDAPTFREVAPHVITLLSGRTLVAHNAR
FDTQFLDHEFSRAGLSTRPPTPSLCTMQLSTSYLRGASRKLKDCCAAANVSHGDVHTLRS
VMRERWPGSWVSISPRAPAQCRGRGRTSPRVATGGRRSKDSARSRRRLERAPSGGRMSGL
TASVPGCLATPNRGSRLTWTSSRERCLTGTCLRTRRRP
NT seq 837 nt   +upstreamnt  +downstreamnt
gtggcgatcaaccgctcattcgcgaatcgcctgcgcaccgggtcccggggtcgtaccttc
ctgtcgaccgatcgacgagaggacgtcatgactggttacacggttctcgacctcgagacc
acgggactgtttccgcagcaacatgaccgcgtcatcgagatcggcatcgtgtccgtctcc
gacgaaggcgaagtcctcgaggaatggtcgaccctggtcaatccgggcagggacgtgggc
ccaactgatctgcacgggatctcggcccgtgacgtgctagacgccccgacctttcgagag
gtggcgccgcatgtcatcaccttgctcagcggtcgcacgctcgtcgcgcacaacgcccgc
ttcgacacgcagtttctcgaccacgagttctcgcgagccgggctcagcacccgcccgccc
actccgtctttgtgcaccatgcagctctccacctcgtacctccggggagcctcccgcaag
ctgaaggactgctgcgcggcggcgaacgtctctcacggcgacgtgcacacactgcgctcg
gtgatgcgagagcggtggccgggctcctgggtttctatctctcccagagcccccgcccag
tgccgtgggaggggacgaacctctccacgcgtagccactggtggccggcgctcgaaggac
tcagcaagatcccgacgaaggctcgagcgagcgccgagcggcggccggatgagtggcttg
accgcatcagttcccggctgcctcgcaaccccgaaccgcgggtcgaggcttacctggacg
tcctcgagagagcgatgcttgacgggtacttgtctgcgcacgaggaggcggccctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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