KEGG T06163: FCL41

Nocardioides jishulii: FCL41_06675

Entry

FCL41_06675       CDS       T06163

Name

(GenBank) type IIA DNA topoisomerase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

noi Nocardioides jishulii

Brite

KEGG Orthology (KO) [BR:noi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:noi03032]
    FCL41_06675
   03400 DNA repair and recombination proteins [BR:noi03400]
    FCL41_06675
Enzymes [BR:noi01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     FCL41_06675
DNA replication proteins [BR:noi03032]
Prokaryotic type
  DNA Topoisomerases
   FCL41_06675
DNA repair and recombination proteins [BR:noi03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      FCL41_06675

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3

Other DBs

NCBI-ProteinID:

QCX27241

Position

1422905..1424977

AA seq 690 aa
MAAPSDNTYNAAHLLVLEGLEAVRKRPGMYIGSTDTRGLMHCLWEIIDNGVDEALAGHAS
NVEVTIHRDGSVEVFDDGRGIPTDKEPKTGLPGVEVVATKLHAGGKFGGGSYNATGGLHG
VGLSVVNALSARVDIDVDRSPAQQGISFRRGVPGIFDGEGPEAPFTPQSGITRKGKKVAK
GRSGTRIRFWPDRQIFTSDARIELEGLVGRARQTSYIVPGLGLTITDLRPEEPVTESFRH
EGGIAEFVDYLSGGEKVTDVLRLQGQGSFTETVPLLDEHGHMTPQEVERELGVDIALKWD
MGYDSNIRSYVNVIATPKGGTHVSGFEQGLTKTFNEVMRTTKALKVNDADVVKDDVIEGL
TAVVTVRLAEPQFEGQTKEILGTPAARNIVRKVVQTELKKYLTSSKRDEKAAAKLVMDKV
AGAARTRLTLRQQKETQRRKNALESSALPAKLADCRATDNERTELFIVEGDSALGTAKLA
RNSEYQALLPIRGKILNVQKASVADMLKNAECASIIQVVGAGSGRTFDLEARRYGRIIFM
ADADSDGAHIRCLLATLFFKYMPGLLEDGRVYTAVPPLHRIELTNPKKGMDKYVYTYSDD
ELQRKLAELKKKNVRWKDPVQRYKGLGEMDADQLQETTMDPRHRTLRRLTVDDAAEAAEV
FELLMGSDVAPRKEFIVQGAYEVDMALLDA

NT seq 2073 nt +upstreamnt +downstreamnt
gtggcagcccccagcgacaacacgtacaacgcagcacacctgctcgtcctcgaaggactc
gaggcggtgcgcaagcgtcccggcatgtacatcggctcgaccgacacccgcggtctcatg
cactgcctgtgggagatcatcgacaacggcgtggacgaggcgcttgctggccacgccagc
aacgtcgaggtcaccatccaccgcgacgggtcggtcgaggtcttcgacgacggccgaggc
atcccgaccgacaaggagccgaagacgggcctcccgggagtcgaggtggtggccaccaag
ctccacgccggtggcaagttcggtggcggttcctacaacgccaccggcggtctgcacggc
gtgggtctctcggtcgtcaacgccctgagcgcgcgcgtcgacatcgacgtcgaccgctcg
cccgcccagcaaggaatttccttccggcgcggtgtgcccggcatcttcgacggcgaggga
ccggaggcacccttcacgccgcagtcgggcatcactcgcaagggcaagaaggtggccaag
gggcgcagcggcacccgcatccgcttctggcccgaccgccagatcttcacctccgacgcc
cgcatcgagctggagggcctcgtcggtcgcgcccgccagacctcgtacatcgtgcccggc
ctcgggctgacgatcaccgacctgcgtcccgaggagccggtcaccgagagcttccgtcac
gagggcggcatcgccgagttcgtcgactacctctccggcggcgagaaggtcaccgacgtc
ctgcggctccagggccagggctccttcaccgagaccgtgccgctgctcgacgagcacggc
cacatgacgccccaggaggtcgagcgcgagctcggcgtcgacatcgccctgaagtgggac
atgggctacgactccaacatccgctcgtacgtcaacgtgatcgccacccccaagggaggc
acgcacgtcagcggcttcgagcagggcctcaccaagaccttcaacgaggtgatgcgcacg
accaaggcgctcaaggtcaacgacgccgacgtcgtcaaggacgacgtcatcgagggcctc
accgccgtcgtcaccgtgcggctggccgagccgcagttcgagggccagaccaaggagatc
ctcggcacccccgcggcgcgcaacatcgtgcgcaaggtcgtgcagactgagctgaagaag
tacctcacctccagcaagcgcgacgagaaggccgccgcgaagctcgtcatggacaaggtg
gccggtgccgcccgcacccgtctgacgctgcgccagcagaaggagacccagcgccgcaag
aacgccctggagtcctcggcgctgcccgccaagctcgccgactgtcgcgcgacggacaac
gagcgcaccgagctcttcatcgtcgagggtgactcggcgctcggcacggccaagctggcc
cgcaactccgagtaccaggcgctgctgcccatccgcggcaagatcctcaacgtgcagaag
gcctcggtcgccgacatgctgaagaacgccgagtgcgcctcgatcatccaggtggtgggc
gcgggctcggggcgcaccttcgacctcgaggcccgtcgctacggccgcatcatcttcatg
gccgacgccgactccgacggtgcccacatccggtgcctgctggcgacgctcttcttcaag
tacatgccaggcctgctcgaggacggtcgcgtctacaccgcggtgccgccgctgcaccgg
atcgagctgaccaaccccaagaaggggatggacaagtacgtctacacgtactccgacgac
gagctgcagcggaagctggccgagctcaagaagaagaacgtgcggtggaaggacccggtc
cagcggtacaagggtctgggcgagatggacgccgaccagctccaggagaccacgatggac
ccgcggcaccgtacgctgcgccggctcaccgtcgacgacgccgcagaggccgccgaggtc
ttcgagctgctgatgggctccgacgtcgctccgcgcaaggagttcatcgtgcagggtgcc
tacgaggtcgacatggctctgctggacgcctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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