KEGG   Noviherbaspirillum sp. UKPF54: FAY22_01155
Entry
FAY22_01155       CDS       T06116                                 
Name
(GenBank) DUF2345 domain-containing protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
nok  Noviherbaspirillum sp. UKPF54
Pathway
nok03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nok00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FAY22_01155
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nok02044]
    FAY22_01155
Secretion system [BR:nok02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FAY22_01155
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 DUF3540 Sarcoglycan_1
Other DBs
NCBI-ProteinID: QDZ30389
UniProt: A0A5B8NAC7
Position
260667..263651
AA seq 994 aa
MPARLDGFSSDTRLYEIETPLGPDRLLVECWFGRERLSALYEWRVFCLAADVHLELKSLV
AQQVFLRTRLADGTQAVRSGWVSQVEQLGADGGFARYCLTVVPWLWLATQRRNSRALQDK
SVLGIVEEVFAADGERANWRIAPEVERFLARVRPRSYCCQYRESDYAFVARLLAEEGIGF
YFEEDPDSGNSLSRQRLVLFADSSAFADDYSSGKEGALHLQRNGAAERRDSIQALGSTRR
LPSAITTVSTWDYRAKHVIAASLPSAQPFGGGQAPRVESCDWAGVYAFASADEAEHYARI
LREAADAGAKTWFGDGGVRTFRAGRAFDLAAPLGLALAAPDNAQGKRFALLDVLHAGVNN
LPVALKEVSARLGAVGPAACGEAGAPMGDASSPHPHGGADCDDHFDPVAWSRLREAAEIT
GYANRFAAIRADVPWRPALYDGTGALLNPKPTAWGSQTAIVVGPDGSTADAGTVHSDRLG
RIRIRFHWQHNGDASCWVRVAQMFAGPGYGAQFIPRIGQEVLVKFFENDIDRPIVTGVLY
NGQGQDADDAFAQVVDHVTAGQDNKIGSGASPAWHGAAGQHRHAGYLSGFKSVALGADGY
TRQSNQLIFDDTAARLRTSLATDTAATQLNLGHLIHQSDNYRGSFRGSGWELRTDAYGAV
RAGKGILISTGNGGVTGAQPESAGDNAPGIALLKQARDFANTFNQSAAVHQTVQFVLVKG
GALSGENRLSRVGDGLAPIDAMLKALSGQVDAQDGSMHGPGPQIPHMHQPLVVVTAQAGI
GVAAADGLHVAAGEVAHFASGRDTQIAAGDTLTLHTGQALGLLAGAAGAGDGNTGIQLYA
GQGDVELQAQDDGITLAAKETVKLASTSGHVDFAAAKSITLCTEGGASMTIEGGNITFAC
PGTISIRAASKSFGGPANICRDMPAWSTSKFDEKFVIADELTGEPLKNQPYRITLPDKQA
IEGITNDKGETSLATSAAYGSLKLQLLPKNKGQP
NT seq 2985 nt   +upstreamnt  +downstreamnt
atccccgcccggcttgacggcttcagttcggacacccggctctacgaaatagaaaccccg
cttggcccggaccggctgctggtcgaatgctggttcgggcgggagcgattgtccgcgctg
tacgaatggcgcgtcttctgccttgccgccgacgtccacctcgaactcaagtcgctcgtc
gcgcagcaggtcttcctgcgcacgcggctcgccgacggcacgcaagccgtgcgcagcggc
tgggtgtcgcaggtcgagcagctcggcgccgacggcgggtttgcgcgctattgcctgacg
gtcgtgccatggctgtggctggcaacgcagcggcgcaacagccgcgccctccaggacaag
agcgtcctcggcatcgtggaagaagtcttcgccgccgacggcgaaagggcaaactggcgc
atcgcgcccgaggtcgagcgcttcctggcgcgcgtgcgcccgcgcagctactgttgccag
taccgtgagagcgattacgcgttcgtggcgagactgctggccgaggaggggatcggcttc
tatttcgaggaagacccggattccggcaacagtctttcccggcagcggctcgtgctgttt
gccgactcgtccgccttcgccgacgactattcttcaggcaaggaaggcgcactccacctc
cagcgtaatggcgccgccgaacggcgtgacagcatccaggcgctcggcagcacgcgtcgg
ctgccgagcgcaatcacgaccgtcagcacctgggactaccgtgccaagcacgtgatcgcg
gcatcgctgccgagcgcgcagcccttcggcggcgggcaagcgccgcgcgtcgaatcctgc
gactgggccggcgtgtatgccttcgcaagcgccgacgaggccgagcactatgcgcgcatc
ctgcgcgaggccgccgatgccggcgccaagacctggttcggcgacggcggcgtgcgcacg
ttccgcgccggcagagcgttcgacctggcggcgccgctcggtcttgcgctcgccgccccg
gacaatgcgcagggcaagcggttcgcgctgctggacgtgctgcatgctggcgtcaacaac
ctgccggtcgcgttgaaggaggtatccgcccgcctcggggcggtcggtccggccgcatgc
ggcgaggcaggcgcgccgatgggcgatgcgtcatctccccacccgcacggcggtgccgac
tgcgacgatcatttcgatcccgttgcctggtcccgcctgcgggaagcggccgaaatcacc
ggatatgccaatcgctttgccgccatccgcgccgacgtgccgtggcgcccggcgctatac
gacggcaccggtgcgctgctcaatcccaaacccactgcctggggcagccagaccgccatc
gtggtcggcccggacggctccaccgccgatgcgggcacggtccacagcgaccgtctggga
cgcatccgcatccgctttcactggcagcataacggcgacgcaagctgctgggtgcgcgtg
gcgcaaatgttcgccggccccggctacggcgcgcaattcatcccgcgcatcgggcaggaa
gtactggtcaagttcttcgagaacgacatcgaccggccgatcgtcaccggcgtgctgtac
aacgggcaggggcaggacgcagacgacgccttcgcacaggtggtcgaccacgtaacggcc
gggcaggacaacaagataggaagcggcgcgtcgccggcctggcatggcgccgccggccag
caccggcatgccggatacctgtccggcttcaagtcggtggcattaggggcggacggctac
acgcgccagtccaaccagctgatcttcgacgacaccgccgcgcgcctgcgcaccagcctg
gcgaccgacactgccgccacccaactgaacctcggccacctgatccaccagagcgacaac
taccgcggcagctttcgcggcagcggatgggaattgcgaaccgatgcctatggcgcagtc
cgcgcaggaaaggggatcttgatcagcaccggcaacggcggtgtaaccggggcccagccc
gaatccgccggcgacaacgcgcccggcatcgccctgctgaagcaggccagggattttgcc
aacaccttcaaccagtcggcggcagtacatcagacggtgcagttcgtcctggtcaagggc
ggcgcattgagcggtgaaaataggctaagccgggtcggcgatggactggctccgattgat
gcgatgctaaaagcgctctctggtcaggttgatgcgcaggacggcagcatgcacggcccg
gggccgcagattccgcacatgcaccagccgctggtggtcgttaccgcacaagccggcatc
ggcgtggcagctgccgacggcttgcatgtcgccgctggcgaagtggcgcatttcgccagc
gggcgggatacgcagatcgcggccggtgatacgctgacgctgcacaccgggcaggcgctc
ggtctgctggccggggcggcgggcgcaggcgacggcaataccggcatccagctgtatgca
gggcagggcgatgtcgaactgcaggcgcaagacgacgggataacgctggcggcaaaggag
acggtcaagctcgccagtacgagtggtcatgtcgattttgccgcggccaagagcatcacg
ctgtgcaccgaaggcggcgcgagcatgacgatcgagggaggcaatatcaccttcgcctgt
ccggggacgatttcgatcagggcggcgagcaagagctttggcgggccggccaatatctgc
cgcgatatgccagcctggtcgacgagcaaatttgacgaaaaattcgtgatcgcggatgag
ctgaccggtgagccgctgaagaatcaaccgtaccgcatcacgctccccgacaagcaggcc
atcgaggggatcacgaatgacaagggcgaaacctctcttgccaccagtgctgcctacggc
agcctcaagctgcagctcctcccgaagaacaagggacaaccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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