KEGG   Noviherbaspirillum sp. UKPF54: FAY22_04415
Entry
FAY22_04415       CDS       T06116                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
nok  Noviherbaspirillum sp. UKPF54
Pathway
nok00260  Glycine, serine and threonine metabolism
nok00460  Cyanoamino acid metabolism
nok00630  Glyoxylate and dicarboxylate metabolism
nok00670  One carbon pool by folate
nok00680  Methane metabolism
nok01100  Metabolic pathways
nok01110  Biosynthesis of secondary metabolites
nok01120  Microbial metabolism in diverse environments
nok01200  Carbon metabolism
nok01230  Biosynthesis of amino acids
nok01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:nok00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    FAY22_04415
  09102 Energy metabolism
   00680 Methane metabolism
    FAY22_04415
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FAY22_04415
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    FAY22_04415
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    FAY22_04415
Enzymes [BR:nok01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     FAY22_04415
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Aminotran_5 Beta_elim_lyase Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: QDZ27261
UniProt: A0A5B8N2U3
Position
927657..928904
AA seq 415 aa
MFAKDHTIAKVDPELWSAIQQENQRQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDVAETLAINRLKELFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLNEKEEIDYDAMEKLAREKKPKLIIAGASAYALR
IDFERFSKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL
MKAEHEKAINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQQQVVKNADALAKALI
ARGLRIVSGRTESHVMLVDLRAKKITGKEAEAILGSAHMTCNKNAIPNDPEKPFVTSGIR
LGSPAMTTRGFKEAEATKVGNLIADVLDNPHDAATIERVKAEVKKLTDAFPVYAR
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgttcgcaaaagaccacaccatcgccaaagtcgatccggaactttggtccgccatccag
caggaaaaccagcgccagcaagaccatatcgagctgatcgcgtccgaaaactacacctcg
ccggccgtgatggaagcgcaaggctcgcagctgaccaacaagtacgcggaaggctatccg
ggcaagcgctattacggcggctgcgagttcgttgacgtggccgagactctggcgatcaac
cgcctgaaggaattgttcggcgcggaagccgccaatgtgcagccgaattccggttcgcag
gcgaaccaaggcgtgttcttcgcgatgctcaagccgggcgacaccatcatgggcatgtcg
ctggcggaaggcggccatctgacccacggcatggcactgaacatgtccggcaagtggttc
aacgtcgtttcctacggcttgaacgagaaggaagagatcgattacgacgcgatggaaaag
ctggcgcgcgaaaagaagcccaagctgatcattgccggtgcctccgcctatgcgttgcgc
atcgacttcgagcgtttctccaagatcgcgaaagaggtcggcgcctatttcatggtcgac
atggctcactatgccggcctgatcgccgccggtgtttatccgaatccggtgccgttcgcc
gacttcgtgacatccaccacccacaagtcgctacgcggcccgcgcggtggcgtgatcctg
atgaaggccgagcatgaaaaggcgatcaactccgctatcttccctggcatccagggcggt
ccgctgatgcatgtgatcgcaggcaaggcagttgcattcaaggaagcactgtcgccggaa
ttcaaggcataccagcagcaagtggtgaagaatgccgatgcactggccaaagcgctgatc
gcgcgcggcttgcgcatcgtatccggtcgcaccgaatcgcacgtgatgctggtcgatctg
cgcgccaagaaaatcaccggcaaggaagccgaagcgatcctcggttctgcccatatgacc
tgcaacaagaacgcgatcccgaacgacccggaaaagccgttcgtcacctccggtatccgc
ctcggcagcccggcgatgaccacccgcggcttcaaggaagcggaagcgaccaaggtcggc
aacctgatcgccgacgtgctggacaatccgcacgacgccgcgaccatcgagcgcgtgaag
gcggaagttaagaagctgaccgacgctttcccggtatacgcacgctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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