KEGG   Noviherbaspirillum sp. UKPF54: FAY22_13885
Entry
FAY22_13885       CDS       T06116                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
nok  Noviherbaspirillum sp. UKPF54
Pathway
nok00300  Lysine biosynthesis
nok00550  Peptidoglycan biosynthesis
nok01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:nok00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    FAY22_13885
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FAY22_13885
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:nok01011]
    FAY22_13885
Enzymes [BR:nok01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     FAY22_13885
Peptidoglycan biosynthesis and degradation proteins [BR:nok01011]
 Precursor biosynthesis
  Amino acid ligase
   FAY22_13885
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: QDZ28953
UniProt: A0A5B8N865
Position
complement(3015544..3017079)
AA seq 511 aa
MLAVTASVTNILNWLEAEAPAAQLSSDSRTIRAGDVFFAYPGDAADGRRYIESAIQRGAR
AVIFEADGFQWNAAWTVPHMAVHDLKKAAGPVANAHYGQPDAAMFTVAVTGTNGKTSCSQ
WLGSALSRQGEPTAVVGSLGVGLYRRGAHAGLANTGYTTPDAVLLQRKLAELRDAGARAL
AIEASSIGLEQGRLNGMHVDVALFTNFTRDHLDYHGDMAAYEAAKKMLFDWPGLKHAVIN
LDDDMGVRLVEHLRKARPQLPVTGYTLAEREIDGIAVLRASEIRTSHGGTTFKLDCAAGS
AQMKTQLVGQFNVSNVLGIFGVLLAKGIAFKAATEAVEVLTAVPGRMEQLGGQDAPLVVI
DYAHTPDALEKTLSTLRQVAQQRSGELWCVFGCGGDRDPGKRPQMGRVAQAADRIIVTSD
NPRSEEPATILAQIVQGIDTAALATDALHVIEDRASAILWAVRHAGKNDVVLLAGKGHEP
YQEIKGKRLPFLDADHAALALAARATMKGNH
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgctggctgtgactgcttccgtaaccaatatcctgaactggctcgaggccgaggcgccg
gcggcgcagctgtcgtcggattcgcgcacgatccgcgccggtgacgtgttcttcgcctat
ccgggcgacgctgccgatggccggcgttatatcgaaagcgccatccagcgcggcgccagg
gcggtcattttcgaagccgacggcttccagtggaacgctgcatggacggtgccgcacatg
gccgtgcacgacctcaagaaggccgccggcccggtcgcgaacgcccattacggccagccc
gatgccgccatgttcaccgtggccgtgactggcaccaacggcaagacctcgtgcagccaa
tggctcggcagcgccctgtcacgtcagggcgagccgaccgcagtggtcggctcgctcggc
gtcggcctgtaccggcgcggcgctcacgccggccttgccaataccggctatacgacaccc
gacgccgtcctgttgcagcgcaagctggcggaactgcgcgatgccggcgccagggcgctt
gctatcgaggcatcgtcgatcggcctcgaacagggacgcctaaatggcatgcatgtggac
gtcgccctgttcaccaacttcacgcgcgaccacctcgattatcacggcgacatggccgca
tacgaagcagccaagaaaatgctgttcgactggccgggattgaaacatgcggtaatcaat
ctcgacgacgacatgggcgtacgcctggtcgaacatctcaggaaagcgcgtccgcaactg
ccggtcaccggttatacgctggcggagcgggagatcgacggcattgcggtcctgcgcgcg
agcgagatccgcaccagccatggcggcaccacgttcaagctggattgcgcagccggttcc
gcccaaatgaagacgcaacttgtcggccaatttaatgtcagtaacgtcctcggcattttc
ggcgtgctgctggcgaaaggcattgcctttaaggcagcgaccgaggcggtggaagtgctg
accgcggtgccgggccgcatggagcagctgggcgggcaggacgcgccgctggtggtgatc
gattacgcgcacacgccggatgcgctggaaaagacgctgtcgacgctgcgccaggtggcg
cagcagcgcagcggcgaactgtggtgcgtgttcggctgcggcggcgatcgtgacccgggc
aagcgtccgcagatggggcgcgtggcgcaggccgccgaccgcatcatcgtcaccagcgac
aatccgcgcagcgaggagccggcaactattctggcgcagattgtccaaggcatcgacacg
gcggctctggcgacggatgcattgcacgtgatcgaggaccgcgcttccgcgattctgtgg
gcggtgcggcatgcagggaagaacgatgtggttctgctggccggcaagggccatgagccg
tatcaggaaatcaagggcaagagattgccttttttggatgcagaccatgccgcgctggca
ttggctgcacgagcaacgatgaaggggaatcattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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