KEGG   Noviherbaspirillum sp. UKPF54: FAY22_20935
Entry
FAY22_20935       CDS       T06116                                 
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
nok  Noviherbaspirillum sp. UKPF54
Pathway
nok03030  DNA replication
nok03430  Mismatch repair
nok03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nok00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FAY22_20935 (ssb)
   03430 Mismatch repair
    FAY22_20935 (ssb)
   03440 Homologous recombination
    FAY22_20935 (ssb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nok03032]
    FAY22_20935 (ssb)
   03400 DNA repair and recombination proteins [BR:nok03400]
    FAY22_20935 (ssb)
   03029 Mitochondrial biogenesis [BR:nok03029]
    FAY22_20935 (ssb)
DNA replication proteins [BR:nok03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FAY22_20935 (ssb)
DNA repair and recombination proteins [BR:nok03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     FAY22_20935 (ssb)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    FAY22_20935 (ssb)
Mitochondrial biogenesis [BR:nok03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    FAY22_20935 (ssb)
SSDB
Motif
Pfam: SSB DUF5342 tRNA_anti-codon Lyase_8_N
Other DBs
NCBI-ProteinID: QDZ30206
UniProt: A0A5B8NDM2
Position
4530800..4531288
AA seq 162 aa
MASVNKVIIVGNLGRDPETRYMPNGEAVTNVAVATTESWKDKNSGEKKELTEWHRITFYR
KLAEIAGQYLKKGSQVYVEGRLQTRKWTDKEGVERYTTEIIADTMQMLGSRQGMGGGAPA
PMDDDYGSAPAPRQSAGGGGAARPAASRPAPNFSDMDDDIPF
NT seq 489 nt   +upstreamnt  +downstreamnt
atggcctcggtcaataaagtcattatcgtcggcaacctggggcgcgatccggaaacgcgc
tacatgccgaacggcgaagccgtcaccaatgtcgcggtagcgaccacggaaagctggaaa
gacaagaatagcggcgagaagaaggaattgaccgaatggcaccgcatcacgttctaccgc
aagctcgctgaaatcgccggccaatacctgaagaagggctcgcaagtctatgtcgaaggg
cgcctgcagacgcgcaaatggaccgacaaggaaggcgtcgagcgttataccaccgagatc
atcgccgataccatgcagatgctgggtagccgccagggtatgggcggcggcgcaccggcg
ccgatggatgacgactacggcagtgcgccggcgccgcgccaaagcgcaggcggcggcggt
gcggcccgtccggcagcgtcccgtccggcgccgaacttcagcgacatggatgacgacatt
ccattctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system