KEGG   Nostoc sp. PCC 7107: Nos7107_2690
Entry
Nos7107_2690      CDS       T02362                                 
Name
(GenBank) ribonuclease, Rne/Rng family
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
nos  Nostoc sp. PCC 7107
Pathway
nos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Nos7107_2690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nos03019]
    Nos7107_2690
   03009 Ribosome biogenesis [BR:nos03009]
    Nos7107_2690
Enzymes [BR:nos01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     Nos7107_2690
Messenger RNA biogenesis [BR:nos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Nos7107_2690
Ribosome biogenesis [BR:nos03009]
 Prokaryotic type
  rRNA processing factors
   Nos7107_2690
SSDB
Motif
Pfam: RNase_E_G DNA_ligase_IV
Other DBs
NCBI-ProteinID: AFY43290
UniProt: K9QCA7
Position
complement(3124291..3126354)
AA seq 687 aa
MPKQIIIAEQHQIAAVFSEDQIQELVVATGHHQIGDIYLGVVENVLPGIDAAFVNIGDPE
RNGFIHVTDLGPLKLKRTAAAITELLAPQQKVLVQVMKEPTGTKGPRLTGNITLPGRYVV
LMPYGRGVNLSRRIKSENERNRLRALAILIKPAGMGLLVRTEAEGKPEEAIMEDLELLQK
QWEAIQQEAQSTRAPALLNRDDDFIQRVLRDMYGADVNRIVVDSSTGLKRVKQYLQNWSG
GQTPQGLLIDHHRDRSPILEYFRINAAIREALKPRVDLPSGGYIIIEPTEALTVIDVNSG
SFTRSATARETVLWTNCEAATEIARQLRLRNIAGVIVVDFIDMESRRDQLHVLEHFNKAL
KADKARPQIAQLTELGLVELTRKRQGQNIYELFGGTCQTCGGLGHIVHLPGENENRLPTP
AEVPERFVSLPQREPRLPVARITEPRESFDSFGDNFDADTDLSSLNLVNHPSYHELGDNN
KRGSRTNRRRRIGINGANGKDETRLAPNSLGFENDTELDLDNEVDLSPTPEIPTPSLGKS
GWTERIERNKVIKTEPVKPVVEPPEIRTVEMTLEEQDVFALMGISPLVKLDREVKNPKSV
IINVVQPGQGASTPPETPSATTITDTPNKEVNISPPVELEQQSPPPEKVELDGFATNAEE
SEANLTATGSRRRRRRSSAVDSNSEDN
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgccaaaacaaattatcatcgcagagcagcatcaaattgctgccgtattttcggaagat
caaatacaagaactcgttgtagccacaggccatcaccaaattggtgatatctacttaggt
gtagtagaaaatgtattacccggaattgacgcagcttttgtaaatattggtgatccagaa
cgtaatggctttattcatgtcacagacttaggccctttgaagttaaagcgcacagccgca
gccattacagaactactagcaccacagcaaaaagtgctggtgcaagtcatgaaggagcca
accggtaccaaagggccgagactaacaggtaacattactttacctggacgttatgtagta
ctcatgccttatggtcgaggtgtaaatttatctcgccggattaaaagtgaaaatgagcgt
aatcgcctccgggcgttagcaattttaatcaaacctgcggggatgggtttgctggtacga
acagaagccgaaggcaaacccgaagaagccattatggaagacttggaattgctgcaaaaa
caatgggaggccattcagcaagaagcacaatcaacccgtgcgccagcactgctgaaccgg
gatgatgactttatccagcgggtattgcgggatatgtacggtgcagatgtcaaccgaatt
gtggtagactccagcactggactgaagcgggtgaaacagtacttgcagaactggagtggc
ggacagacaccacaaggattgttaattgatcatcaccgcgatcgctcacccatattagaa
tacttccgcatcaatgccgccattcgggaagctctcaaacccagagtggatttaccttct
ggcggctacatcattattgagccaacagaagccctcaccgtaattgatgttaactctggt
tccttcacgcgatcggcaacagccagagaaacagtattgtggacaaattgcgaagccgcc
acagaaattgcccgccaattgcgactgcgaaatatcgccggagtcattgttgtagacttc
atcgatatggaatcgcggcgcgaccaactgcacgttctggagcatttcaacaaagcactc
aaagcagataaagctcgcccccaaatcgctcaacttacagaacttggcttagtagaactc
acacgcaaacgccaaggtcaaaatatttatgaattgtttggtggaacttgtcaaacctgt
ggtggtttaggacacatagtccatttacccggagaaaacgaaaaccgcttaccaacacca
gcagaagtgcctgagcgtttcgtatccttgccccaaagagaacctcgtttaccagtagcg
cggatcacagaaccaagagaaagctttgatagctttggtgacaattttgatgctgacaca
gatttaagctccttgaatttagtcaatcatcccagctatcacgaattgggtgataacaat
aagcgtggtagtcgcactaaccgtcgtagacgcattggcatcaatggcgcaaatggtaaa
gatgaaacaaggcttgctcctaattcgctaggttttgagaatgataccgagctagatctg
gataatgaagttgacttaagcccaacaccagaaatccctacacccagcttaggtaaatca
ggttggacagaaagaatcgaacgcaataaagtcatcaaaacagaaccagtcaaaccagtg
gttgaaccaccagagattagaactgtagaaatgactttagaagaacaagatgtttttgct
ttgatgggaatatcccccttagtgaaattagatcgagaagtcaaaaatcccaagtcggtg
attattaatgttgttcagccaggacaaggggcaagtacacccccagaaacgccctccgct
acaactattaccgatacccccaataaagaagtaaacatctcaccgccagtagagttagag
caacaatctccaccaccagaaaaagttgagttagatggatttgccactaatgctgaagaa
tctgaagcaaatctaactgcaacaggtagccgtcgccgccgtcgtcgttcctctgctgta
gattctaattctgaggacaattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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